Learning a deep language model for microbiomes: The power of large scale unlabeled microbiome data

• Quintin Pope ,

  Roles Formal analysis, Investigation, Methodology, Software, Validation, Visualization, Writing – original draft, Writing – review & editing

  * E-mail: popeq@oregonstate.edu

  Affiliation School of Electrical Engineering and Computer Science, Oregon State University, Corvallis, Oregon, United States of America

  https://orcid.org/0009-0002-6014-9643

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• Rohan Varma ,

  Roles Investigation, Methodology, Software, Validation

  ¶‡ Work performed as a student at Oregon State University.

  Affiliation School of Electrical Engineering and Computer Science, Oregon State University, Corvallis, Oregon, United States of America

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• Christine Tataru ,

  Roles Data curation, Software

  ¶‡ Work performed as a student at Oregon State University.

  Affiliation Department of Pathology, Brigham and Women’s Hospital, Boston, Massachusetts, United States of America

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• Maude M David,

  Roles Data curation, Funding acquisition, Software, Validation, Writing – original draft, Writing – review & editing

  Affiliations Department of Pharmaceutical Sciences, Oregon State University, Corvallis, Oregon, United States of America, Department of Pharmaceutical Sciences, Oregon State University, Corvallis, Oregon, United States of America

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• Xiaoli Fern

  Roles Conceptualization, Funding acquisition, Methodology, Project administration, Supervision, Validation, Writing – original draft, Writing – review & editing

  Affiliation School of Electrical Engineering and Computer Science, Oregon State University, Corvallis, Oregon, United States of America

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