Fast and versatile sequence-independent protein docking for nanomaterials design using RPXDock

• William Sheffler ,

  Contributed equally to this work with: William Sheffler, Erin C. Yang, Quinton Dowling, Yang Hsia

  Roles Conceptualization, Data curation, Formal analysis, Software, Writing – original draft, Writing – review & editing

  Affiliation Institute for Protein Design, University of Washington, Seattle, Washington, United States of America

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• Erin C. Yang ,

  Contributed equally to this work with: William Sheffler, Erin C. Yang, Quinton Dowling, Yang Hsia

  Roles Conceptualization, Data curation, Formal analysis, Software, Writing – original draft, Writing – review & editing

  Affiliations Institute for Protein Design, University of Washington, Seattle, Washington, United States of America, Department of Biochemistry, University of Washington, Seattle, Washington, United States of America, Graduate Program in Biological Physics, Structure & Design, University of Washington, Seattle, Washington, United States of America

  https://orcid.org/0000-0002-1305-9066

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• Quinton Dowling ,

  Contributed equally to this work with: William Sheffler, Erin C. Yang, Quinton Dowling, Yang Hsia

  Roles Conceptualization, Data curation, Formal analysis, Software, Writing – original draft

  Affiliations Institute for Protein Design, University of Washington, Seattle, Washington, United States of America, Department of Bioengineering, University of Washington, Seattle, Washington, United States of America

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• Yang Hsia ,

  Contributed equally to this work with: William Sheffler, Erin C. Yang, Quinton Dowling, Yang Hsia

  Roles Conceptualization, Data curation, Formal analysis, Software, Writing – original draft, Writing – review & editing

  Affiliation Institute for Protein Design, University of Washington, Seattle, Washington, United States of America

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• Chelsea N. Fries,

  Roles Data curation, Formal analysis, Software, Writing – review & editing

  Affiliation Institute for Protein Design, University of Washington, Seattle, Washington, United States of America

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• Jenna Stanislaw,

  Roles Data curation, Software

  Affiliations Institute for Protein Design, University of Washington, Seattle, Washington, United States of America, Department of Biochemistry, University of Washington, Seattle, Washington, United States of America, Transdisciplinary Research Area “Building Blocks of Matter and Fundamental Interactions (TRA Matter)”, University of Bonn, Bonn, Germany, Life and Medical Sciences Institute, University of Bonn, Bonn, Germany

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• Mark D. Langowski,

  Roles Data curation, Software

  Affiliations Institute for Protein Design, University of Washington, Seattle, Washington, United States of America, Graduate Program in Molecular and Cellular Biology, University of Washington, Seattle, Washington, United States of America

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• Marisa Brandys,

  Roles Data curation

  Affiliations Institute for Protein Design, University of Washington, Seattle, Washington, United States of America, Department of Biochemistry, University of Washington, Seattle, Washington, United States of America

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• Zhe Li,

  Roles Data curation

  Affiliation Institute for Protein Design, University of Washington, Seattle, Washington, United States of America

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• Rebecca Skotheim,

  Roles Data curation, Formal analysis

  Affiliation Institute for Protein Design, University of Washington, Seattle, Washington, United States of America

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• Andrew J. Borst,

  Roles Data curation, Formal analysis

  Affiliations Institute for Protein Design, University of Washington, Seattle, Washington, United States of America, Department of Biochemistry, University of Washington, Seattle, Washington, United States of America

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• Alena Khmelinskaia,

  Roles Conceptualization, Data curation, Formal analysis, Software, Writing – review & editing

  Affiliations Institute for Protein Design, University of Washington, Seattle, Washington, United States of America, Department of Biochemistry, University of Washington, Seattle, Washington, United States of America, Transdisciplinary Research Area “Building Blocks of Matter and Fundamental Interactions (TRA Matter)”, University of Bonn, Bonn, Germany, Life and Medical Sciences Institute, University of Bonn, Bonn, Germany

  https://orcid.org/0000-0003-1584-9800

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• Neil P. King,

  Roles Conceptualization, Funding acquisition, Supervision, Writing – review & editing

  Affiliations Institute for Protein Design, University of Washington, Seattle, Washington, United States of America, Department of Biochemistry, University of Washington, Seattle, Washington, United States of America

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• David Baker

  Roles Conceptualization, Funding acquisition, Supervision, Writing – review & editing

  * E-mail: dabaker@uw.edu

  Affiliations Institute for Protein Design, University of Washington, Seattle, Washington, United States of America, Department of Biochemistry, University of Washington, Seattle, Washington, United States of America, Howard Hughes Medical Institute, University of Washington, Seattle, Washington, United States of America

  https://orcid.org/0000-0001-7896-6217

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