Integrated view and comparative analysis of baseline protein expression in mouse and rat tissues

Shengbo Wang; David García-Seisdedos; Ananth Prakash; Deepti Jaiswal Kundu; Andrew Collins; Nancy George; Silvie Fexova; Pablo Moreno; Irene Papatheodorou; Andrew R. Jones; Juan Antonio Vizcaíno

doi:10.1371/journal.pcbi.1010174

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Open Access

Peer-reviewed

Research Article

Integrated view and comparative analysis of baseline protein expression in mouse and rat tissues

Shengbo Wang ,

Roles Data curation, Formal analysis, Software, Validation, Writing – original draft, Writing – review & editing

¶‡ All three authors have contributed equally and they wish to be considered as joint first authors.

Affiliation European Molecular Biology Laboratory - European Bioinformatics Institute (EMBL-EBI), Wellcome Genome Campus, Hinxton, Cambridge, United Kingdom

https://orcid.org/0000-0001-5034-6374

⨯
David García-Seisdedos ,

Roles Conceptualization, Data curation, Formal analysis, Investigation, Resources, Software, Validation, Visualization, Writing – original draft, Writing – review & editing

¶‡ All three authors have contributed equally and they wish to be considered as joint first authors.

Affiliations European Molecular Biology Laboratory - European Bioinformatics Institute (EMBL-EBI), Wellcome Genome Campus, Hinxton, Cambridge, United Kingdom, Open Targets, Wellcome Genome Campus, Hinxton, Cambridge, United Kingdom
⨯
Ananth Prakash ,

Roles Conceptualization, Data curation, Formal analysis, Resources, Software, Validation, Visualization, Writing – original draft, Writing – review & editing

* E-mail: ananth@ebi.ac.uk (AP); juan@ebi.ac.uk (JAV)

¶‡ All three authors have contributed equally and they wish to be considered as joint first authors.

Affiliations European Molecular Biology Laboratory - European Bioinformatics Institute (EMBL-EBI), Wellcome Genome Campus, Hinxton, Cambridge, United Kingdom, Open Targets, Wellcome Genome Campus, Hinxton, Cambridge, United Kingdom

https://orcid.org/0000-0001-5799-9618

⨯
Deepti Jaiswal Kundu,

Roles Data curation

Affiliation European Molecular Biology Laboratory - European Bioinformatics Institute (EMBL-EBI), Wellcome Genome Campus, Hinxton, Cambridge, United Kingdom

https://orcid.org/0000-0003-2989-5971

⨯
Andrew Collins,

Roles Software, Writing – review & editing

Affiliation Institute of Systems, Molecular and Integrative Biology, University of Liverpool, Liverpool, United Kingdom

https://orcid.org/0000-0003-0507-6912

⨯
Nancy George,

Roles Data curation, Validation, Visualization

Affiliation European Molecular Biology Laboratory - European Bioinformatics Institute (EMBL-EBI), Wellcome Genome Campus, Hinxton, Cambridge, United Kingdom

https://orcid.org/0000-0003-4183-8865

⨯
Silvie Fexova,

Roles Data curation, Validation, Visualization

Affiliation European Molecular Biology Laboratory - European Bioinformatics Institute (EMBL-EBI), Wellcome Genome Campus, Hinxton, Cambridge, United Kingdom

https://orcid.org/0000-0003-3440-1876

⨯
Pablo Moreno,

Roles Validation, Visualization

Affiliation European Molecular Biology Laboratory - European Bioinformatics Institute (EMBL-EBI), Wellcome Genome Campus, Hinxton, Cambridge, United Kingdom

https://orcid.org/0000-0002-9856-1679

⨯
Irene Papatheodorou,

Roles Funding acquisition, Project administration, Supervision, Writing – review & editing

Affiliations European Molecular Biology Laboratory - European Bioinformatics Institute (EMBL-EBI), Wellcome Genome Campus, Hinxton, Cambridge, United Kingdom, Open Targets, Wellcome Genome Campus, Hinxton, Cambridge, United Kingdom
⨯
Andrew R. Jones,

Roles Funding acquisition, Software, Supervision, Writing – review & editing

Affiliation Institute of Systems, Molecular and Integrative Biology, University of Liverpool, Liverpool, United Kingdom

https://orcid.org/0000-0001-6118-9327

⨯
Juan Antonio Vizcaíno

Roles Conceptualization, Funding acquisition, Investigation, Project administration, Supervision, Writing – original draft, Writing – review & editing

* E-mail: ananth@ebi.ac.uk (AP); juan@ebi.ac.uk (JAV)

Affiliations European Molecular Biology Laboratory - European Bioinformatics Institute (EMBL-EBI), Wellcome Genome Campus, Hinxton, Cambridge, United Kingdom, Open Targets, Wellcome Genome Campus, Hinxton, Cambridge, United Kingdom

https://orcid.org/0000-0002-3905-4335

⨯

Integrated view and comparative analysis of baseline protein expression in mouse and rat tissues

Shengbo Wang,
David García-Seisdedos,
Ananth Prakash,
Deepti Jaiswal Kundu,
Andrew Collins,
Nancy George,
Silvie Fexova,
Pablo Moreno,
Irene Papatheodorou,
Andrew R. Jones

Published: June 17, 2022
https://doi.org/10.1371/journal.pcbi.1010174

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Protein expression
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Proteomic databases
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Heart
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Protein abundance
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