Probing T-cell response by sequence-based probabilistic modeling

• Barbara Bravi,

  Roles Conceptualization, Data curation, Formal analysis, Investigation, Methodology, Software, Validation, Visualization, Writing – original draft, Writing – review & editing

  Affiliation Laboratoire de Physique de l’Ecole Normale Supérieure, ENS, Université PSL, CNRS, Sorbonne Université, Université de Paris, Paris, France

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• Vinod P. Balachandran,

  Roles Conceptualization, Funding acquisition, Writing – original draft, Writing – review & editing

  Affiliation Immuno-Oncology Service, Human Oncology and Pathogenesis Program, Hepatopancreatobiliary Service, Department of Surgery, Memorial Sloan Kettering Cancer Center, New York, New York State, United States of America

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• Benjamin D. Greenbaum,

  Roles Conceptualization, Funding acquisition, Writing – original draft, Writing – review & editing

  Affiliation Computational Oncology, Department of Epidemiology and Biostatistics, Memorial Sloan Kettering Cancer Center, New York, New York State, United States of America

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• Aleksandra M. Walczak ,

  Contributed equally to this work with: Aleksandra M. Walczak, Thierry Mora, Rémi Monasson, Simona Cocco

  Roles Conceptualization, Formal analysis, Funding acquisition, Investigation, Methodology, Supervision, Validation, Writing – original draft, Writing – review & editing

  Affiliation Laboratoire de Physique de l’Ecole Normale Supérieure, ENS, Université PSL, CNRS, Sorbonne Université, Université de Paris, Paris, France

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• Thierry Mora ,

  Contributed equally to this work with: Aleksandra M. Walczak, Thierry Mora, Rémi Monasson, Simona Cocco

  Roles Conceptualization, Formal analysis, Funding acquisition, Investigation, Methodology, Supervision, Validation, Writing – original draft, Writing – review & editing

  Affiliation Laboratoire de Physique de l’Ecole Normale Supérieure, ENS, Université PSL, CNRS, Sorbonne Université, Université de Paris, Paris, France

  https://orcid.org/0000-0002-5456-9361

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• Rémi Monasson ,

  Contributed equally to this work with: Aleksandra M. Walczak, Thierry Mora, Rémi Monasson, Simona Cocco

  Roles Conceptualization, Formal analysis, Funding acquisition, Investigation, Methodology, Supervision, Validation, Writing – original draft, Writing – review & editing

  Affiliation Laboratoire de Physique de l’Ecole Normale Supérieure, ENS, Université PSL, CNRS, Sorbonne Université, Université de Paris, Paris, France

  https://orcid.org/0000-0002-4459-0204

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• Simona Cocco

  Contributed equally to this work with: Aleksandra M. Walczak, Thierry Mora, Rémi Monasson, Simona Cocco

  Roles Conceptualization, Formal analysis, Funding acquisition, Investigation, Methodology, Supervision, Validation, Writing – original draft, Writing – review & editing

  * E-mail: simona.cocco@phys.ens.fr

  Affiliation Laboratoire de Physique de l’Ecole Normale Supérieure, ENS, Université PSL, CNRS, Sorbonne Université, Université de Paris, Paris, France

  https://orcid.org/0000-0002-1852-7789

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