miQC: An adaptive probabilistic framework for quality control of single-cell RNA-sequencing data

• Ariel A. Hippen,

  Roles Data curation, Formal analysis, Investigation, Methodology, Software, Visualization, Writing – original draft, Writing – review & editing

  Affiliation Department of Systems Pharmacology and Translational Therapeutics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, United States of America

  https://orcid.org/0000-0001-9336-6543

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• Matias M. Falco,

  Roles Investigation, Resources, Software, Writing – review & editing

  Affiliation Research Program in Systems Oncology, Research Programs Unit, Faculty of Medicine, University of Helsinki, Helsinki, Finland

  https://orcid.org/0000-0002-6813-0050

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• Lukas M. Weber,

  Roles Investigation, Software, Writing – review & editing

  Affiliation Department of Biostatistics, Johns Hopkins Bloomberg School of Public Health, Baltimore, Maryland, United States of America

  https://orcid.org/0000-0002-3282-1730

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• Erdogan Pekcan Erkan,

  Roles Investigation, Resources, Writing – review & editing

  Affiliation Research Program in Systems Oncology, Research Programs Unit, Faculty of Medicine, University of Helsinki, Helsinki, Finland

  https://orcid.org/0000-0001-9287-4773

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• Kaiyang Zhang,

  Roles Investigation

  Affiliation Research Program in Systems Oncology, Research Programs Unit, Faculty of Medicine, University of Helsinki, Helsinki, Finland

  https://orcid.org/0000-0002-0470-9581

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• Jennifer Anne Doherty,

  Roles Funding acquisition, Resources, Writing – review & editing

  Affiliation Huntsman Cancer Institute and Department of Population Health Sciences, University of Utah, Salt Lake City, Utah, United States of America

  https://orcid.org/0000-0002-1454-8187

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• Anna Vähärautio ,

  Roles Funding acquisition, Supervision, Writing – review & editing

  * E-mail: anna.vaharautio@helsinki.fi (AV); shicks19@jhu.edu (SCH)

  Affiliation Research Program in Systems Oncology, Research Programs Unit, Faculty of Medicine, University of Helsinki, Helsinki, Finland

  https://orcid.org/0000-0003-4721-3954

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• Casey S. Greene,

  Roles Funding acquisition, Resources, Supervision, Writing – review & editing

  Affiliation Department of Biochemistry and Molecular Genetics, University of Colorado School of Medicine, Aurora, Colorado, United States of America

  https://orcid.org/0000-0001-8713-9213

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• Stephanie C. Hicks

  Roles Conceptualization, Funding acquisition, Methodology, Resources, Supervision, Writing – original draft, Writing – review & editing

  * E-mail: anna.vaharautio@helsinki.fi (AV); shicks19@jhu.edu (SCH)

  Affiliation Department of Biostatistics, Johns Hopkins Bloomberg School of Public Health, Baltimore, Maryland, United States of America

  https://orcid.org/0000-0002-7858-0231

  ⨯