eVIP2: Expression-based variant impact phenotyping to predict the function of gene variants

• Alexis M. Thornton,

  Roles Conceptualization, Data curation, Formal analysis, Funding acquisition, Investigation, Methodology, Project administration, Software, Visualization, Writing – original draft, Writing – review & editing

  Affiliations Department of Biomolecular Engineering, University of California Santa Cruz, Santa Cruz, California, United States of America, UCSC Genomics Institute, University of California Santa Cruz, Santa Cruz, California, United States of America

  https://orcid.org/0000-0002-7987-2543

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• Lishan Fang,

  Roles Investigation, Validation, Visualization, Writing – review & editing

  Affiliations Department of Medical Oncology, Dana-Farber Cancer Institute, Harvard Medical School, Boston, Massachusetts, United States of America, Broad Institute of Massachusetts Institute of Technology and Harvard, Cambridge, Massachusetts, United States of America, Department of Orthopedics, The Eight Affiliated Hospital of Sun Yat-sen University, Shenzhen, China

  https://orcid.org/0000-0002-0183-861X

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• April Lo,

  Roles Data curation, Software, Writing – review & editing

  Affiliation Fred Hutchinson Cancer Research Center, Seattle, Washington, United States of America

  https://orcid.org/0000-0001-6128-9846

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• Maria McSharry,

  Roles Investigation, Writing – review & editing

  Affiliation Fred Hutchinson Cancer Research Center, Seattle, Washington, United States of America

  https://orcid.org/0000-0001-5962-5441

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• David Haan,

  Roles Formal analysis

  Affiliations Department of Biomolecular Engineering, University of California Santa Cruz, Santa Cruz, California, United States of America, UCSC Genomics Institute, University of California Santa Cruz, Santa Cruz, California, United States of America

  https://orcid.org/0000-0001-6842-1010

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• Casey O’Brien,

  Roles Investigation, Writing – review & editing

  Affiliations Department of Medical Oncology, Dana-Farber Cancer Institute, Harvard Medical School, Boston, Massachusetts, United States of America, Broad Institute of Massachusetts Institute of Technology and Harvard, Cambridge, Massachusetts, United States of America

  https://orcid.org/0000-0002-6572-4881

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• Alice H. Berger ,

  Roles Conceptualization, Funding acquisition, Investigation, Methodology, Resources, Supervision, Writing – review & editing

  ¶‡ These authors are joint senior authors on this work.

  Affiliation Fred Hutchinson Cancer Research Center, Seattle, Washington, United States of America

  https://orcid.org/0000-0002-6538-2658

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• Marios Giannakis ,

  Roles Conceptualization, Funding acquisition, Investigation, Methodology, Resources, Supervision, Validation, Writing – review & editing

  ¶‡ These authors are joint senior authors on this work.

  Affiliations Department of Medical Oncology, Dana-Farber Cancer Institute, Harvard Medical School, Boston, Massachusetts, United States of America, Broad Institute of Massachusetts Institute of Technology and Harvard, Cambridge, Massachusetts, United States of America

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• Angela N. Brooks

  Roles Conceptualization, Data curation, Formal analysis, Funding acquisition, Methodology, Project administration, Resources, Software, Supervision, Writing – original draft, Writing – review & editing

  * E-mail: anbrooks@ucsc.edu

  ¶‡ These authors are joint senior authors on this work.

  Affiliations Department of Biomolecular Engineering, University of California Santa Cruz, Santa Cruz, California, United States of America, UCSC Genomics Institute, University of California Santa Cruz, Santa Cruz, California, United States of America

  https://orcid.org/0000-0002-7898-3073

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