A deep learning algorithm for 3D cell detection in whole mouse brain image datasets

• Adam L. Tyson ,

  Contributed equally to this work with: Adam L. Tyson, Charly V. Rousseau, Christian J. Niedworok

  Roles Conceptualization, Data curation, Formal analysis, Methodology, Software, Validation, Visualization, Writing – original draft, Writing – review & editing

  * E-mail: adam@adamltyson.com (ALT); t.margrie@ucl.ac.uk (TWM)

  Affiliation Sainsbury Wellcome Centre, University College London, London, United Kingdom

  https://orcid.org/0000-0003-3225-1130

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• Charly V. Rousseau ,

  Contributed equally to this work with: Adam L. Tyson, Charly V. Rousseau, Christian J. Niedworok

  Roles Conceptualization, Data curation, Methodology, Software, Writing – review & editing

  Current address: Sorbonne Université, Institut du Cerveau - Paris Brain Institute - ICM, Inserm, CNRS, Paris, France

  Affiliation Sainsbury Wellcome Centre, University College London, London, United Kingdom

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• Christian J. Niedworok ,

  Contributed equally to this work with: Adam L. Tyson, Charly V. Rousseau, Christian J. Niedworok

  Roles Conceptualization, Data curation, Methodology, Software, Writing – review & editing

  Affiliation Sainsbury Wellcome Centre, University College London, London, United Kingdom

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• Sepiedeh Keshavarzi,

  Roles Investigation, Methodology, Writing – review & editing

  Affiliation Sainsbury Wellcome Centre, University College London, London, United Kingdom

  https://orcid.org/0000-0002-7310-8034

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• Chryssanthi Tsitoura,

  Roles Investigation, Methodology, Writing – review & editing

  Affiliation Sainsbury Wellcome Centre, University College London, London, United Kingdom

  https://orcid.org/0000-0002-9856-0043

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• Lee Cossell,

  Roles Formal analysis, Validation, Writing – review & editing

  Affiliation Sainsbury Wellcome Centre, University College London, London, United Kingdom

  https://orcid.org/0000-0002-5363-3157

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• Molly Strom,

  Roles Investigation, Writing – review & editing

  Affiliation Sainsbury Wellcome Centre, University College London, London, United Kingdom

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• Troy W. Margrie

  Roles Conceptualization, Formal analysis, Project administration, Writing – original draft, Writing – review & editing

  * E-mail: adam@adamltyson.com (ALT); t.margrie@ucl.ac.uk (TWM)

  Affiliation Sainsbury Wellcome Centre, University College London, London, United Kingdom

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