Evaluation of residue-residue contact prediction methods: From retrospective to prospective

Huiling Zhang; Zhendong Bei; Wenhui Xi; Min Hao; Zhen Ju; Konda Mani Saravanan; Haiping Zhang; Ning Guo; Yanjie Wei

doi:10.1371/journal.pcbi.1009027

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Open Access

Peer-reviewed

Research Article

Evaluation of residue-residue contact prediction methods: From retrospective to prospective

Huiling Zhang,

Roles Conceptualization, Data curation, Formal analysis, Funding acquisition, Investigation, Methodology, Software, Validation, Visualization, Writing – original draft, Writing – review & editing

Affiliations University of Chinese Academy of Sciences, Beijing, China, Centre for High Performance Computing, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen, China

https://orcid.org/0000-0002-7856-2703

⨯
Zhendong Bei,

Roles Formal analysis, Funding acquisition, Software, Visualization, Writing – original draft, Writing – review & editing

Affiliation Cloud Computing Department, Alibaba Group, Hangzhou, China
⨯
Wenhui Xi,

Roles Conceptualization, Data curation, Formal analysis, Funding acquisition, Methodology

Affiliation Centre for High Performance Computing, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen, China

https://orcid.org/0000-0003-4272-7518

⨯
Min Hao,

Roles Formal analysis, Investigation, Software, Writing – original draft, Writing – review & editing

Affiliation College of Electronic and Information Engineering, Southwest University, Chongqing, China

https://orcid.org/0000-0001-5696-7745

⨯
Zhen Ju,

Roles Formal analysis, Investigation, Software, Writing – original draft, Writing – review & editing

Affiliations University of Chinese Academy of Sciences, Beijing, China, Centre for High Performance Computing, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen, China

https://orcid.org/0000-0001-7720-1570

⨯
Konda Mani Saravanan,

Roles Conceptualization, Formal analysis

Affiliation Centre for High Performance Computing, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen, China

https://orcid.org/0000-0002-5541-234X

⨯
Haiping Zhang,

Roles Conceptualization, Formal analysis

Affiliation Centre for High Performance Computing, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen, China

https://orcid.org/0000-0003-2133-1768

⨯
Ning Guo,

Roles Formal analysis, Writing – original draft

Affiliation Centre for High Performance Computing, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen, China

https://orcid.org/0000-0003-3434-3717

⨯
Yanjie Wei

Roles Conceptualization, Data curation, Formal analysis, Funding acquisition, Investigation, Methodology, Project administration, Supervision, Writing – original draft, Writing – review & editing

* E-mail: yj.wei@siat.ac.cn

Affiliations University of Chinese Academy of Sciences, Beijing, China, Centre for High Performance Computing, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen, China
⨯

Evaluation of residue-residue contact prediction methods: From retrospective to prospective

Huiling Zhang,
Zhendong Bei,
Wenhui Xi,
Min Hao,
Zhen Ju,
Konda Mani Saravanan,
Haiping Zhang,
Ning Guo,
Yanjie Wei

Published: May 24, 2021
https://doi.org/10.1371/journal.pcbi.1009027

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Forecasting
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Protein structure prediction
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Protein structure
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Salt bridges
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Structural proteins
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Protein folding
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Disulfide bonds
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