Using machine learning and big data to explore the drug resistance landscape in HIV

• Luc Blassel ,

  Roles Conceptualization, Data curation, Formal analysis, Investigation, Methodology, Software, Visualization, Writing – original draft

  * E-mail: luc.blassel@pasteur.fr (LB); olivier.gascuel@mnhn.fr (OG)

  Affiliations Unité de Bioinformatique Évolutive, Institut Pasteur, Paris, France, Sorbonne Université, Collège doctoral, Paris, France

  https://orcid.org/0000-0002-6598-7673

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• Anna Tostevin,

  Roles Data curation, Funding acquisition, Validation, Writing – review & editing

  Affiliation Institute for Global Health, UCL, London, United Kingdom

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• Christian Julian Villabona-Arenas,

  Roles Data curation, Validation, Writing – review & editing

  Affiliations Department of Infectious Disease Epidemiology, London School of Hygiene and Tropical Medicine, London, United Kingdom, Centre for Mathematical Modelling of Infectious Diseases, London School of Hygiene and Tropical Medicine, London, United Kingdom

  https://orcid.org/0000-0001-9928-3968

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• Martine Peeters,

  Roles Data curation, Validation, Writing – review & editing

  Affiliation TransVIHMI (Recherches Translationnelles sur VIH et Maladies Infectieuses), Université de Montpellier, Institut de Recherche pour le Développement, INSERM, Montpellier, France

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• Stéphane Hué,

  Roles Conceptualization, Data curation, Validation, Writing – review & editing

  Affiliations Department of Infectious Disease Epidemiology, London School of Hygiene and Tropical Medicine, London, United Kingdom, Centre for Mathematical Modelling of Infectious Diseases, London School of Hygiene and Tropical Medicine, London, United Kingdom

  https://orcid.org/0000-0002-8580-6905

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• Olivier Gascuel ,

  Roles Conceptualization, Formal analysis, Funding acquisition, Investigation, Methodology, Project administration, Resources, Supervision, Validation, Writing – original draft

  * E-mail: luc.blassel@pasteur.fr (LB); olivier.gascuel@mnhn.fr (OG)

  ¤ Current address: Institut de Systématique, Evolution, Biodiversité (ISYEB), UMR 7205 - Muséum National d’Histoire Naturelle, CNRS, SU, EPHE and UA, Paris, France

  Affiliations Unité de Bioinformatique Évolutive, Institut Pasteur, Paris, France, Institut de Systématique, Evolution, Biodiversité (ISYEB), UMR 7205 - Muséum National d’Histoire Naturelle, CNRS, SU, EPHE and UA, Paris, France

  https://orcid.org/0000-0002-9412-9723

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• On behalf of the UK HIV Drug Resistance Database

  ¶Membership list can be found in the acknowledgments section.

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