Demonstrating the utility of flexible sequence queries against indexed short reads with FlexTyper

• Phillip Andrew Richmond ,

  Contributed equally to this work with: Phillip Andrew Richmond, Alice Mary Kaye

  Roles Conceptualization, Data curation, Formal analysis, Investigation, Methodology, Resources, Software, Validation, Visualization, Writing – original draft, Writing – review & editing

  Affiliation Centre for Molecular Medicine and Therapeutics, Department of Medical Genetics, BC Children’s Hospital Research Institute, University of British Columbia, Vancouver, Canada

  https://orcid.org/0000-0003-1882-6014

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• Alice Mary Kaye ,

  Contributed equally to this work with: Phillip Andrew Richmond, Alice Mary Kaye

  Roles Conceptualization, Investigation, Methodology, Software, Visualization, Writing – original draft, Writing – review & editing

  Affiliation Centre for Molecular Medicine and Therapeutics, Department of Medical Genetics, BC Children’s Hospital Research Institute, University of British Columbia, Vancouver, Canada

  https://orcid.org/0000-0002-0021-9112

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• Godfrain Jacques Kounkou,

  Roles Software

  Affiliation Centre for Molecular Medicine and Therapeutics, Department of Medical Genetics, BC Children’s Hospital Research Institute, University of British Columbia, Vancouver, Canada

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• Tamar Vered Av-Shalom,

  Roles Data curation, Formal analysis, Software

  Affiliation Centre for Molecular Medicine and Therapeutics, Department of Medical Genetics, BC Children’s Hospital Research Institute, University of British Columbia, Vancouver, Canada

  https://orcid.org/0000-0001-5786-7762

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• Wyeth W. Wasserman

  Roles Project administration, Supervision, Writing – review & editing

  * E-mail: wyeth@cmmt.ubc.ca

  Affiliation Centre for Molecular Medicine and Therapeutics, Department of Medical Genetics, BC Children’s Hospital Research Institute, University of British Columbia, Vancouver, Canada

  https://orcid.org/0000-0001-6098-6412

  ⨯