Inferring evolutionary pathways and directed genotype networks of foodborne pathogens

• Oliver M. Cliff,

  Roles Conceptualization, Formal analysis, Investigation, Methodology, Software, Visualization, Writing – original draft, Writing – review & editing

  Affiliation Centre for Complex Systems, Faculty of Engineering, University of Sydney, Sydney, New South Wales, Australia

  https://orcid.org/0000-0001-5041-4090

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• Natalia McLean,

  Roles Investigation, Methodology, Software, Writing – review & editing

  Affiliation Centre for Complex Systems, Faculty of Engineering, University of Sydney, Sydney, New South Wales, Australia

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• Vitali Sintchenko,

  Roles Conceptualization, Data curation, Funding acquisition, Investigation, Methodology, Writing – review & editing

  Affiliations Marie Bashir Institute for Infectious Diseases and Biosecurity, University of Sydney, Westmead, New South Wales, Australia, Centre for Infectious Diseases and Microbiology – Public Health, Institute of Clinical Pathology and Medical Research, NSW Health Pathology, Westmead Hospital, Sydney, New South Wales, Australia

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• Kristopher M. Fair,

  Roles Software, Writing – review & editing

  Affiliation Centre for Complex Systems, Faculty of Engineering, University of Sydney, Sydney, New South Wales, Australia

  https://orcid.org/0000-0001-7559-9300

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• Tania C. Sorrell,

  Roles Conceptualization, Funding acquisition, Writing – review & editing

  Affiliations Marie Bashir Institute for Infectious Diseases and Biosecurity, University of Sydney, Westmead, New South Wales, Australia, Centre for Infectious Diseases and Microbiology – Public Health, Institute of Clinical Pathology and Medical Research, NSW Health Pathology, Westmead Hospital, Sydney, New South Wales, Australia

  https://orcid.org/0000-0001-9460-0960

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• Stuart Kauffman,

  Roles Methodology, Writing – review & editing

  Affiliation Institute for Systems Biology, Seattle, Washington, USA

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• Mikhail Prokopenko

  Roles Conceptualization, Formal analysis, Funding acquisition, Investigation, Methodology, Project administration, Resources, Supervision, Visualization, Writing – original draft, Writing – review & editing

  * E-mail: mikhail.prokopenko@sydney.edu.au

  Affiliations Centre for Complex Systems, Faculty of Engineering, University of Sydney, Sydney, New South Wales, Australia, Marie Bashir Institute for Infectious Diseases and Biosecurity, University of Sydney, Westmead, New South Wales, Australia

  https://orcid.org/0000-0002-4215-0344

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