seekCRIT: Detecting and characterizing differentially expressed circular RNAs using high-throughput sequencing data

Mohamed Chaabane; Kalina Andreeva; Jae Yeon Hwang; Tae Lim Kook; Juw Won Park; Nigel G. F. Cooper

doi:10.1371/journal.pcbi.1008338

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Open Access

Peer-reviewed

Research Article

seekCRIT: Detecting and characterizing differentially expressed circular RNAs using high-throughput sequencing data

Mohamed Chaabane ,

Contributed equally to this work with: Mohamed Chaabane, Kalina Andreeva

Roles Formal analysis, Software, Writing – original draft

Current address: Department of Computer Science, Colorado State University, Fort Collins, Colorado, United States of America

Affiliation Department of Computer Science and Engineering, University of Louisville, Louisville, Kentucky, United States of America
⨯
Kalina Andreeva ,

Contributed equally to this work with: Mohamed Chaabane, Kalina Andreeva

Roles Validation, Writing – original draft

Affiliation Department of Anatomical Sciences and Neurobiology, University of Louisville, Louisville, Kentucky, United States of America

https://orcid.org/0000-0002-5206-532X

⨯
Jae Yeon Hwang,

Roles Formal analysis, Validation, Writing – review & editing

Affiliation Department of Computer Science and Engineering, University of Louisville, Louisville, Kentucky, United States of America

https://orcid.org/0000-0002-7247-0146

⨯
Tae Lim Kook,

Roles Data curation, Software

Affiliation Department of Computer Science and Engineering, University of Louisville, Louisville, Kentucky, United States of America

https://orcid.org/0000-0003-2505-3443

⨯
Juw Won Park ,

Roles Conceptualization, Funding acquisition, Investigation, Supervision, Writing – review & editing

* E-mail: juw.park@louisville.edu (JWP); nigel.cooper@louisville.edu (NGFC)

Affiliations Department of Computer Science and Engineering, University of Louisville, Louisville, Kentucky, United States of America, KBRIN Bioinformatics Core, University of Louisville, Louisville, Kentucky, United States of America

https://orcid.org/0000-0002-4610-6893

⨯
Nigel G. F. Cooper

Roles Conceptualization, Funding acquisition, Writing – review & editing

* E-mail: juw.park@louisville.edu (JWP); nigel.cooper@louisville.edu (NGFC)

Affiliations Department of Anatomical Sciences and Neurobiology, University of Louisville, Louisville, Kentucky, United States of America, KBRIN Bioinformatics Core, University of Louisville, Louisville, Kentucky, United States of America

https://orcid.org/0000-0001-6598-5136

⨯

seekCRIT: Detecting and characterizing differentially expressed circular RNAs using high-throughput sequencing data

Mohamed Chaabane,
Kalina Andreeva,
Jae Yeon Hwang,
Tae Lim Kook,
Juw Won Park,
Nigel G. F. Cooper

Published: October 20, 2020
https://doi.org/10.1371/journal.pcbi.1008338

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