MASSpy: Building, simulating, and visualizing dynamic biological models in Python using mass action kinetics

• Zachary B. Haiman,

  Roles Data curation, Formal analysis, Investigation, Methodology, Software, Validation, Visualization, Writing – original draft, Writing – review & editing

  Affiliation Department of Bioengineering, University of California San Diego, La Jolla, California, United States of America

  https://orcid.org/0000-0001-6175-5050

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• Daniel C. Zielinski,

  Roles Data curation, Formal analysis, Investigation, Methodology, Supervision, Visualization, Writing – original draft, Writing – review & editing

  Affiliation Department of Bioengineering, University of California San Diego, La Jolla, California, United States of America

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• Yuko Koike,

  Roles Investigation, Methodology, Software, Writing – original draft, Writing – review & editing

  Affiliations Department of Bioengineering, University of California San Diego, La Jolla, California, United States of America, Institute for Systems Biology, Seattle, Washington, United States of America

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• James T. Yurkovich,

  Roles Conceptualization, Investigation, Methodology, Supervision, Visualization, Writing – original draft, Writing – review & editing

  Affiliations Department of Bioengineering, University of California San Diego, La Jolla, California, United States of America, Institute for Systems Biology, Seattle, Washington, United States of America

  https://orcid.org/0000-0002-9403-509X

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• Bernhard O. Palsson

  Roles Conceptualization, Funding acquisition, Investigation, Methodology, Project administration, Resources, Supervision, Writing – original draft, Writing – review & editing

  * E-mail: palsson@ucsd.edu

  Affiliations Department of Bioengineering, University of California San Diego, La Jolla, California, United States of America, Novo Nordisk Foundation Center for Biosustainability, Technical University of Denmark, Kongens Lyngby, Denmark

  https://orcid.org/0000-0003-2357-6785

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