AlbaTraDIS: Comparative analysis of large datasets from parallel transposon mutagenesis experiments

Andrew J. Page; Sarah Bastkowski; Muhammad Yasir; A. Keith Turner; Thanh Le Viet; George M. Savva; Mark A. Webber; Ian G. Charles

doi:10.1371/journal.pcbi.1007980

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Open Access

Peer-reviewed

Research Article

AlbaTraDIS: Comparative analysis of large datasets from parallel transposon mutagenesis experiments

Andrew J. Page,

Roles Methodology, Software, Writing – original draft

Affiliation Quadram Institute Bioscience, Norwich Research Park, Colney Lane, Norwich, United Kingdom

http://orcid.org/0000-0001-6919-6062

⨯
Sarah Bastkowski ,

Roles Methodology, Software, Writing – original draft, Writing – review & editing

* E-mail: sarah.bastkowski@quadram.ac.uk

Affiliation Quadram Institute Bioscience, Norwich Research Park, Colney Lane, Norwich, United Kingdom

http://orcid.org/0000-0001-9002-1822

⨯
Muhammad Yasir,

Roles Data curation, Investigation, Validation, Writing – review & editing

Affiliation Quadram Institute Bioscience, Norwich Research Park, Colney Lane, Norwich, United Kingdom

http://orcid.org/0000-0001-9437-2996

⨯
A. Keith Turner,

Roles Data curation, Investigation, Validation, Writing – review & editing

Affiliation Quadram Institute Bioscience, Norwich Research Park, Colney Lane, Norwich, United Kingdom

http://orcid.org/0000-0002-3680-6343

⨯
Thanh Le Viet,

Roles Software

Affiliation Quadram Institute Bioscience, Norwich Research Park, Colney Lane, Norwich, United Kingdom

http://orcid.org/0000-0002-2106-8130

⨯
George M. Savva,

Roles Methodology, Writing – review & editing

Affiliation Quadram Institute Bioscience, Norwich Research Park, Colney Lane, Norwich, United Kingdom

http://orcid.org/0000-0001-9190-124X

⨯
Mark A. Webber,

Roles Conceptualization, Investigation, Resources, Supervision, Writing – review & editing

Affiliations Quadram Institute Bioscience, Norwich Research Park, Colney Lane, Norwich, United Kingdom, University of East Anglia, Norwich Research Park, Norwich, United Kingdom
⨯
Ian G. Charles

Roles Conceptualization, Funding acquisition, Supervision

Affiliations Quadram Institute Bioscience, Norwich Research Park, Colney Lane, Norwich, United Kingdom, University of East Anglia, Norwich Research Park, Norwich, United Kingdom

http://orcid.org/0000-0002-2423-1167

⨯

AlbaTraDIS: Comparative analysis of large datasets from parallel transposon mutagenesis experiments

Andrew J. Page,
Sarah Bastkowski,
Muhammad Yasir,
A. Keith Turner,
Thanh Le Viet,
George M. Savva,
Mark A. Webber,
Ian G. Charles

Published: July 17, 2020
https://doi.org/10.1371/journal.pcbi.1007980
See the preprint

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Genomics
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Transposable elements
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Transposon mutagenesis
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Gene expression
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Bacterial genomics
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DNA transcription
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Genomic signal processing
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Gene regulation
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