PenDA, a rank-based method for personalized differential analysis: Application to lung cancer

Magali Richard; Clémentine Decamps; Florent Chuffart; Elisabeth Brambilla; Sophie Rousseaux; Saadi Khochbin; Daniel Jost

doi:10.1371/journal.pcbi.1007869

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Open Access

Peer-reviewed

Research Article

PenDA, a rank-based method for personalized differential analysis: Application to lung cancer

Magali Richard ,

Roles Conceptualization, Data curation, Formal analysis, Funding acquisition, Investigation, Methodology, Project administration, Resources, Software, Supervision, Validation, Visualization, Writing – original draft, Writing – review & editing

* E-mail: magali.richard@univ-grenoble-alpes.fr (MR); daniel.jost@ens-lyon.fr (DJ)

Affiliation Univ Grenoble Alpes, CNRS, Grenoble INP, TIMC-IMAG, Grenoble, France

http://orcid.org/0000-0003-3165-3218

⨯
Clémentine Decamps,

Roles Data curation, Formal analysis, Investigation, Methodology, Resources, Software, Validation, Visualization, Writing – original draft

Affiliation Univ Grenoble Alpes, CNRS, Grenoble INP, TIMC-IMAG, Grenoble, France

http://orcid.org/0000-0002-2838-4961

⨯
Florent Chuffart,

Roles Data curation, Investigation, Resources, Software, Validation, Visualization

Affiliation CNRS UMR 5309, Inserm U1209, Univ Grenoble Alpes, Institute for Advanced Biosciences, Grenoble, France
⨯
Elisabeth Brambilla,

Roles Funding acquisition, Investigation, Validation

Affiliation CHUGA, Inserm U1209, Univ Grenoble Alpes, Institute for Advanced Biosciences, Grenoble, France
⨯
Sophie Rousseaux,

Roles Investigation, Validation

Affiliation CNRS UMR 5309, Inserm U1209, Univ Grenoble Alpes, Institute for Advanced Biosciences, Grenoble, France

http://orcid.org/0000-0001-5246-5350

⨯
Saadi Khochbin,

Roles Funding acquisition, Investigation

Affiliation CNRS UMR 5309, Inserm U1209, Univ Grenoble Alpes, Institute for Advanced Biosciences, Grenoble, France

http://orcid.org/0000-0002-0455-0857

⨯
Daniel Jost

Roles Conceptualization, Formal analysis, Funding acquisition, Investigation, Methodology, Project administration, Supervision, Validation, Visualization, Writing – original draft, Writing – review & editing

* E-mail: magali.richard@univ-grenoble-alpes.fr (MR); daniel.jost@ens-lyon.fr (DJ)

Affiliations Univ Grenoble Alpes, CNRS, Grenoble INP, TIMC-IMAG, Grenoble, France, University of Lyon, ENS de Lyon, Univ Claude Bernard, CNRS, Laboratory of Biology and Modelling of the Cell, Lyon, France

http://orcid.org/0000-0002-9877-6864

⨯

PenDA, a rank-based method for personalized differential analysis: Application to lung cancer

Magali Richard,
Clémentine Decamps,
Florent Chuffart,
Elisabeth Brambilla,
Sophie Rousseaux,
Saadi Khochbin,
Daniel Jost

Published: May 11, 2020
https://doi.org/10.1371/journal.pcbi.1007869

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Gene expression
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