CoPhosK: A method for comprehensive kinase substrate annotation using co-phosphorylation analysis

• Marzieh Ayati,

  Roles Formal analysis, Investigation, Methodology, Software, Validation, Visualization, Writing – original draft

  Affiliations Department of Electrical Engineering and Computer Science, Case Western Reserve University, Cleveland, OH, Department of Computer Science, University of Texas Rio Grande Valley, Edinburg, TX

  http://orcid.org/0000-0002-5280-5738

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• Danica Wiredja,

  Roles Data curation, Formal analysis

  Affiliation Center for Proteomics and Bioinformatics, Case Western Reserve University, Cleveland, OH

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• Daniela Schlatzer,

  Roles Data curation, Formal analysis

  Affiliation Center for Proteomics and Bioinformatics, Case Western Reserve University, Cleveland, OH

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• Sean Maxwell,

  Roles Data curation, Formal analysis

  Affiliation Center for Proteomics and Bioinformatics, Case Western Reserve University, Cleveland, OH

  http://orcid.org/0000-0002-8924-8111

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• Ming Li,

  Roles Supervision

  Affiliations Center for Proteomics and Bioinformatics, Case Western Reserve University, Cleveland, OH, Department of Population and Quantitative Health Sciences, Case Western Reserve University, Cleveland, OH, Case Comprehensive Cancer Center, Case Western Reserve University, Cleveland, OH

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• Mehmet Koyutürk,

  Roles Conceptualization, Funding acquisition, Investigation, Methodology, Project administration, Resources, Supervision, Writing – original draft, Writing – review & editing

  Affiliations Department of Electrical Engineering and Computer Science, Case Western Reserve University, Cleveland, OH, Center for Proteomics and Bioinformatics, Case Western Reserve University, Cleveland, OH, Case Comprehensive Cancer Center, Case Western Reserve University, Cleveland, OH

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• Mark R. Chance

  Roles Conceptualization, Funding acquisition, Investigation, Methodology, Project administration, Resources, Supervision, Writing – original draft, Writing – review & editing

  * E-mail: mark.chance@case.edu

  Affiliations Center for Proteomics and Bioinformatics, Case Western Reserve University, Cleveland, OH, Case Comprehensive Cancer Center, Case Western Reserve University, Cleveland, OH, Department of Nutrition, Case Western Reserve University, Cleveland, OH

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