Meneco, a Topology-Based Gap-Filling Tool Applicable to Degraded Genome-Wide Metabolic Networks

• Sylvain Prigent ,

  * E-mail: anne.siegel@irisa.fr (AS); prigent@chalmers.se (SP)

  Affiliations Institute for Research in IT and Random Systems - IRISA, Université de Rennes 1, Rennes, France, Department of Biology and Biological Engineering, Chalmers University of Technology, Göteborg, Sweden, Irisa, CNRS, Rennes, France, Dyliss, Inria, Rennes, France

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• Clémence Frioux,

  Affiliations Institute for Research in IT and Random Systems - IRISA, Université de Rennes 1, Rennes, France, Irisa, CNRS, Rennes, France, Dyliss, Inria, Rennes, France

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• Simon M. Dittami,

  Affiliation Sorbonne Universités, UPMC Univ Paris 06, CNRS, UMR 8227, Integrative Biology of Marine Models, Station Biologique de Roscoff, Roscoff, France

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• Sven Thiele,

  Current address: Max Planck Institute for Dynamics of Complex Technical Systems, Magdeburg, Germany

  Affiliation Dyliss, Inria, Rennes, France

  http://orcid.org/0000-0002-5812-6963

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• Abdelhalim Larhlimi,

  Affiliation Computer Science Laboratory of Nantes Atlantique - LINA UMR6241, Université de Nantes, Nantes, France

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• Guillaume Collet,

  Affiliations Institute for Research in IT and Random Systems - IRISA, Université de Rennes 1, Rennes, France, Irisa, CNRS, Rennes, France, Dyliss, Inria, Rennes, France

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• Fabien Gutknecht,

  Affiliation Molecular Genetics, Genomics and Microbiology - GMGM, Université de Strasbourg, Strasbourg, France

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• Jeanne Got,

  Affiliations Institute for Research in IT and Random Systems - IRISA, Université de Rennes 1, Rennes, France, Irisa, CNRS, Rennes, France, Dyliss, Inria, Rennes, France

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• Damien Eveillard,

  Affiliation Computer Science Laboratory of Nantes Atlantique - LINA UMR6241, Université de Nantes, Nantes, France

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• Jérémie Bourdon,

  Affiliation Computer Science Laboratory of Nantes Atlantique - LINA UMR6241, Université de Nantes, Nantes, France

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• Frédéric Plewniak,

  Affiliations Molecular Genetics, Genomics and Microbiology - GMGM, Université de Strasbourg, Strasbourg, France, GMGM, CNRS, Strasbourg, France

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• Thierry Tonon,

  Current address: Centre for Novel Agricultural Products, Department of Biology, University of York, York, UK

  Affiliation Sorbonne Universités, UPMC Univ Paris 06, CNRS, UMR 8227, Integrative Biology of Marine Models, Station Biologique de Roscoff, Roscoff, France

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• Anne Siegel

  * E-mail: anne.siegel@irisa.fr (AS); prigent@chalmers.se (SP)

  Affiliations Institute for Research in IT and Random Systems - IRISA, Université de Rennes 1, Rennes, France, Irisa, CNRS, Rennes, France, Dyliss, Inria, Rennes, France

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