MinePath: Mining for Phenotype Differential Sub-paths in Molecular Pathways

Lefteris Koumakis; Alexandros Kanterakis; Evgenia Kartsaki; Maria Chatzimina; Michalis Zervakis; Manolis Tsiknakis; Despoina Vassou; Dimitris Kafetzopoulos; Kostas Marias; Vassilis Moustakis; George Potamias

doi:10.1371/journal.pcbi.1005187

Loading metrics

Open Access

Peer-reviewed

Research Article

MinePath: Mining for Phenotype Differential Sub-paths in Molecular Pathways

Lefteris Koumakis ,

* E-mail: koumakis@ics.forth.gr

Affiliation Computational BioMedicine Laboratory (CBML), Institute of Computers Science (ICS), Foundation for Research and Technology-Hellas (FORTH), Heraklion, Crete, Greece
⨯
Alexandros Kanterakis,

Affiliation Computational BioMedicine Laboratory (CBML), Institute of Computers Science (ICS), Foundation for Research and Technology-Hellas (FORTH), Heraklion, Crete, Greece
⨯
Evgenia Kartsaki,

Affiliation Computational BioMedicine Laboratory (CBML), Institute of Computers Science (ICS), Foundation for Research and Technology-Hellas (FORTH), Heraklion, Crete, Greece
⨯
Maria Chatzimina,

Affiliation Computational BioMedicine Laboratory (CBML), Institute of Computers Science (ICS), Foundation for Research and Technology-Hellas (FORTH), Heraklion, Crete, Greece
⨯
Michalis Zervakis,

Affiliation School of Electrical and Computer Engineering, Technical University of Crete, Greece
⨯
Manolis Tsiknakis,

Affiliations Computational BioMedicine Laboratory (CBML), Institute of Computers Science (ICS), Foundation for Research and Technology-Hellas (FORTH), Heraklion, Crete, Greece, Department of Informatics Engineering, Technological Educational Institute of Crete, Greece
⨯
Despoina Vassou,

Affiliation Institute of Molecular Biology & Biotechnology, FORTH, Heraklion, Crete, Greece
⨯
Dimitris Kafetzopoulos,

Affiliation Institute of Molecular Biology & Biotechnology, FORTH, Heraklion, Crete, Greece
⨯
Kostas Marias,

Affiliation Computational BioMedicine Laboratory (CBML), Institute of Computers Science (ICS), Foundation for Research and Technology-Hellas (FORTH), Heraklion, Crete, Greece
⨯
Vassilis Moustakis,

Affiliation School of Production Engineering & Management, Technical University of Crete, Greece
⨯
George Potamias

Affiliation Computational BioMedicine Laboratory (CBML), Institute of Computers Science (ICS), Foundation for Research and Technology-Hellas (FORTH), Heraklion, Crete, Greece
⨯

MinePath: Mining for Phenotype Differential Sub-paths in Molecular Pathways

Lefteris Koumakis,
Alexandros Kanterakis,
Evgenia Kartsaki,
Maria Chatzimina,
Michalis Zervakis,
Manolis Tsiknakis,
Despoina Vassou,
Dimitris Kafetzopoulos,
Kostas Marias,
Vassilis Moustakis

Published: November 10, 2016
https://doi.org/10.1371/journal.pcbi.1005187

Reader Comments (0)

Post a new comment on this article

Subject Areas
?

For more information about PLOS Subject Areas, click here.
We want your feedback. Do these Subject Areas make sense for this article? Click the target next to the incorrect Subject Area and let us know. Thanks for your help!

Gene expression
Is the Subject Area "Gene expression" applicable to this article?

Thanks for your feedback.
Gene regulation
Is the Subject Area "Gene regulation" applicable to this article?

Thanks for your feedback.
Phenotypes
Is the Subject Area "Phenotypes" applicable to this article?

Thanks for your feedback.
Genetic causes of cancer
Is the Subject Area "Genetic causes of cancer" applicable to this article?

Thanks for your feedback.
Gastric cancer
Is the Subject Area "Gastric cancer" applicable to this article?

Thanks for your feedback.
Microarrays
Is the Subject Area "Microarrays" applicable to this article?

Thanks for your feedback.
Genetic networks
Is the Subject Area "Genetic networks" applicable to this article?

Thanks for your feedback.
Renal cancer
Is the Subject Area "Renal cancer" applicable to this article?

Thanks for your feedback.