DREISS: Using State-Space Models to Infer the Dynamics of Gene Expression Driven by External and Internal Regulatory Networks

• Daifeng Wang,

  Affiliations Department of Biomedical Informatics, Stony Brook University, Stony Brook, New York, United States of America, Stony Brook Cancer Center, Stony Brook Medicine, Stony Brook, New York, United States of America

  http://orcid.org/0000-0001-9190-3704

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• Fei He,

  Affiliation Biology Department, Brookhaven National Laboratory, Upton, New York, United States of America

  http://orcid.org/0000-0002-1165-3248

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• Sergei Maslov,

  Affiliations Biology Department, Brookhaven National Laboratory, Upton, New York, United States of America, Department of Bioengineering and Carl R. Woese Institute for Genomic Biology, University of Illinois at Urbana-Champaign, Urbana, Illinois, United States of America

  http://orcid.org/0000-0002-3701-492X

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• Mark Gerstein

  * E-mail: mark@gersteinlab.org

  Affiliations Program in Computational Biology and Bioinformatics, Yale University, New Haven, Connecticut, United States of America, Department of Molecular Biophysics and Biochemistry, Yale University, New Haven, Connecticut, United States of America, Department of Computer Science, Yale University, New Haven, Connecticut, United States of America

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