Cache Domains That are Homologous to, but Different from PAS Domains Comprise the Largest Superfamily of Extracellular Sensors in Prokaryotes

Amit A. Upadhyay; Aaron D. Fleetwood; Ogun Adebali; Robert D. Finn; Igor B. Zhulin

doi:10.1371/journal.pcbi.1004862

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Peer-reviewed

Research Article

Cache Domains That are Homologous to, but Different from PAS Domains Comprise the Largest Superfamily of Extracellular Sensors in Prokaryotes

Amit A. Upadhyay,

Affiliations Genome Science and Technology Graduate Program, University of Tennessee–Oak Ridge National Laboratory, Knoxville, Tennessee, United States of America, Department of Microbiology, University of Tennessee, Knoxville, Tennessee, United States of America, Computer Science and Mathematics Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee, United States of America
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Aaron D. Fleetwood,

Affiliations Department of Microbiology, University of Tennessee, Knoxville, Tennessee, United States of America, Computer Science and Mathematics Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee, United States of America
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Ogun Adebali,

Affiliations Genome Science and Technology Graduate Program, University of Tennessee–Oak Ridge National Laboratory, Knoxville, Tennessee, United States of America, Department of Microbiology, University of Tennessee, Knoxville, Tennessee, United States of America, Computer Science and Mathematics Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee, United States of America
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Robert D. Finn,

Affiliation European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, United Kingdom
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Igor B. Zhulin

* E-mail: ijouline@utk.edu

Affiliations Genome Science and Technology Graduate Program, University of Tennessee–Oak Ridge National Laboratory, Knoxville, Tennessee, United States of America, Department of Microbiology, University of Tennessee, Knoxville, Tennessee, United States of America, Computer Science and Mathematics Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee, United States of America
⨯

Cache Domains That are Homologous to, but Different from PAS Domains Comprise the Largest Superfamily of Extracellular Sensors in Prokaryotes

Amit A. Upadhyay,
Aaron D. Fleetwood,
Ogun Adebali,
Robert D. Finn,
Igor B. Zhulin

Published: April 6, 2016
https://doi.org/10.1371/journal.pcbi.1004862

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Protein domains
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Sequence alignment
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