Mechanism of Iron-Dependent Repressor (IdeR) Activation and DNA Binding: A Molecular Dynamics and Protein Structure Network Study

Open Access

Peer-reviewed

Research Article

Soma Ghosh,

Affiliations Molecular Biophysics Unit, Indian Institute of Science, Bangalore, Karnataka, India, I.I.Sc. Mathematics Initiative, Indian Institute of Science, Bangalore, Karnataka, India
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Nagasuma Chandra,

Affiliations I.I.Sc. Mathematics Initiative, Indian Institute of Science, Bangalore, Karnataka, India, Department of Biochemistry, Indian Institute of Science, Bangalore, Karnataka, India
⨯
Saraswathi Vishveshwara

* E-mail: sv@mbu.iisc.ernet.in

Affiliations Molecular Biophysics Unit, Indian Institute of Science, Bangalore, Karnataka, India, I.I.Sc. Mathematics Initiative, Indian Institute of Science, Bangalore, Karnataka, India
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DNA-binding proteins
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Iron
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Biochemical simulations
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Hydrogen bonding
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Dimers
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Free energy
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Allosteric regulation
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Protein structure networks
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