Perm-seq: Mapping Protein-DNA Interactions in Segmental Duplication and Highly Repetitive Regions of Genomes with Prior-Enhanced Read Mapping

• Xin Zeng,

  Affiliation Department of Statistics, University of Wisconsin, Madison, Wisconsin, United States of America

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• Bo Li,

  Affiliation California Institute for Quantitative Biosciences, University of California, Berkeley, California, United States of America

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• Rene Welch,

  Affiliation Department of Statistics, University of Wisconsin, Madison, Wisconsin, United States of America

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• Constanza Rojo ,

  ¶‡ These authors contributed equally.

  Affiliation Department of Statistics, University of Wisconsin, Madison, Wisconsin, United States of America

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• Ye Zheng ,

  ¶‡ These authors contributed equally.

  Affiliation Department of Statistics, University of Wisconsin, Madison, Wisconsin, United States of America

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• Colin N. Dewey,

  Affiliation Department of Biostatistics and Medical Informatics, University of Wisconsin, Madison, Wisconsin, United States of America

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• Sündüz Keleş

  * E-mail: keles@stat.wisc.edu

  Affiliations Department of Statistics, University of Wisconsin, Madison, Wisconsin, United States of America, Department of Biostatistics and Medical Informatics, University of Wisconsin, Madison, Wisconsin, United States of America

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