Inferring the Clonal Structure of Viral Populations from Time Series Sequencing

Open Access

Peer-reviewed

Research Article

Donatien F. Chedom,

Current address: The Wellcome Trust centre for Human Genetics, University of Oxford, Oxford, United Kingdom; Ovarian Cancer Cell Laboratory, Weatherall Institute of Molecular Medicine, Oxford, United Kingdom

Affiliation The Genome Analysis Centre, Norwich Research Park, Norwich, United Kingdom
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Pablo R. Murcia,

Affiliation MRC-University of Glasgow Centre for Virus Research, United Kingdom
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Chris D. Greenman

* E-mail: C.Greenman@uea.ac.uk

Affiliations The Genome Analysis Centre, Norwich Research Park, Norwich, United Kingdom, School of Computing Sciences, University of East Anglia, Norwich, United Kingdom
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Phylogenetic analysis
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Haplotypes
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Cloning
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Viral evolution
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Trees
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Microbial mutation
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RNA structure
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Viral structure
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