The Genealogical Population Dynamics of HIV-1 in a Large Transmission Chain: Bridging within and among Host Evolutionary Rates

• Bram Vrancken ,

  * E-mail: bram.vrancken@rega.kuleuven.be

  Affiliation Department of Microbiology and Immunology, Rega Institute, KU Leuven, Leuven, Belgium

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• Andrew Rambaut,

  Affiliations Institute of Evolutionary Biology, University of Edinburgh, Edinburgh, United Kingdom, Fogarty International Center, National Institutes of Health, Bethesda, Maryland, United States of America

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• Marc A. Suchard,

  Affiliations Department of Biomathematics, David Geffen School of Medicine at UCLA, University of California, Los Angeles, Los Angeles, California, United States of America, Department of Human Genetics, David Geffen School of Medicine at UCLA, University of California, Los Angeles, Los Angeles, California, United States of America, Department of Biostatistics, UCLA Fielding School of Public Health, University of California, Los Angeles Los Angeles, California, United States of America

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• Alexei Drummond,

  Affiliation Allan Wilson Centre for Molecular Ecology and Evolution, University of Auckland, Auckland, New Zealand

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• Guy Baele,

  Affiliation Department of Microbiology and Immunology, Rega Institute, KU Leuven, Leuven, Belgium

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• Inge Derdelinckx,

  Affiliation University Hospitals Leuven, Leuven, Belgium

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• Eric Van Wijngaerden,

  Affiliation University Hospitals Leuven, Leuven, Belgium

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• Anne-Mieke Vandamme,

  Affiliations Department of Microbiology and Immunology, Rega Institute, KU Leuven, Leuven, Belgium, Centro de Malária e Outras Doenças Tropicais Instituto de Higiene e Medicina Tropical and Unidade de Microbiologia, Universidade Nova de Lisboa, Lisboa, Portugal

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• Kristel Van Laethem,

  Affiliation Department of Microbiology and Immunology, Rega Institute, KU Leuven, Leuven, Belgium

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• Philippe Lemey

  Affiliation Department of Microbiology and Immunology, Rega Institute, KU Leuven, Leuven, Belgium

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