Genome Landscapes and Bacteriophage Codon Usage

Julius B. Lucks; David R. Nelson; Grzegorz R. Kudla; Joshua B. Plotkin

doi:10.1371/journal.pcbi.1000001

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Open Access

Peer-reviewed

Research Article

Genome Landscapes and Bacteriophage Codon Usage

Julius B. Lucks,

Affiliation FAS Center for Systems Biology, Harvard University, Cambridge, Massachusetts, United States of America
⨯
David R. Nelson,

Affiliations FAS Center for Systems Biology, Harvard University, Cambridge, Massachusetts, United States of America, Lyman Laboratory of Physics, Harvard University, Cambridge, Massachusetts, United States of America
⨯
Grzegorz R. Kudla,

Affiliation FAS Center for Systems Biology, Harvard University, Cambridge, Massachusetts, United States of America
⨯
Joshua B. Plotkin

* E-mail: jplotkin@sas.upenn.edu

Affiliation Department of Biology, University of Pennsylvania, Philadelphia, Pennsylvania, United States of America
⨯

Genome Landscapes and Bacteriophage Codon Usage

Julius B. Lucks,
David R. Nelson,
Grzegorz R. Kudla,
Joshua B. Plotkin

Published: February 29, 2008
https://doi.org/10.1371/journal.pcbi.1000001

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Supplementary Material about the python code used in this study

Posted by jblucks on 14 Apr 2008 at 05:24 GMT

For more information about the python code developed for this study, and how to use python for scientific programming in general, please see: J. B. Lucks, 'Python: All A Scientist Needs' (http://openwetware.org/wi...)

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Bacteriophages
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Viral genomics
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Genomics
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Protein sequencing
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Structural proteins
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Genome annotation
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Structural genes
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Lactococcus lactis
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Genome Landscapes and Bacteriophage Codon Usage

Genome Landscapes and Bacteriophage Codon Usage

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Supplementary Material about the python code used in this study

Posted by jblucks on 14 Apr 2008 at 05:24 GMT