About the Authors

Pramod Shinde

Roles Data curation, Formal analysis, Investigation, Methodology, Resources, Writing – original draft, Writing – review & editing

Affiliation Center for Vaccine Innovation, La Jolla Institute for Immunology, La Jolla, California, United States of America

Lisa Willemsen

Roles Methodology, Writing – original draft, Writing – review & editing

Affiliation Center for Vaccine Innovation, La Jolla Institute for Immunology, La Jolla, California, United States of America

Michael Anderson

Roles Writing – review & editing

Affiliation Division of Biostatistics and Health Data Science, University of Minnesota, Minneapolis, Minnesota, United States of America

Minori Aoki

Roles Methodology, Writing – review & editing

Affiliation Center for Vaccine Innovation, La Jolla Institute for Immunology, La Jolla, California, United States of America

Saonli Basu

Roles Writing – original draft, Writing – review & editing

Affiliation Division of Biostatistics and Health Data Science, University of Minnesota, Minneapolis, Minnesota, United States of America

Julie G. Burel

Roles Writing – review & editing

Affiliation Center for Vaccine Innovation, La Jolla Institute for Immunology, La Jolla, California, United States of America

Peng Cheng

Roles Writing – review & editing

Affiliation Department of Molecular Biology, School of Biological Sciences, University of California, San Diego, La Jolla, California, United States of America

Souradipto Ghosh Dastidar

Roles Writing – review & editing

Affiliation Division of Biostatistics and Health Data Science, University of Minnesota, Minneapolis, Minnesota, United States of America

Aidan Dunleavy

Roles Writing – review & editing

Affiliation School of Statistics, University of Minnesota, Minneapolis, Minnesota, United States of America

Tal Einav

Roles Writing – review & editing

Affiliations Center for Vaccine Innovation, La Jolla Institute for Immunology, La Jolla, California, United States of America, Department of Medicine, University of California San Diego, San Diego, California, United States of America

Jamie Forschmiedt

Roles Writing – review & editing

Affiliation Division of Biostatistics and Health Data Science, University of Minnesota, Minneapolis, Minnesota, United States of America

Slim Fourati

Roles Writing – review & editing

Affiliation Department of Medicine, Division of Allergy and Immunology, Feinberg School of Medicine and Center for Human Immunobiology, Northwestern University, Chicago, Illinois, United States of America

Javier Garcia

Roles Writing – review & editing

Affiliation Department of Molecular Biology, School of Biological Sciences, University of California, San Diego, La Jolla, California, United States of America

William Gibson

Roles Writing – original draft, Writing – review & editing

Affiliation Vaccine Research Center, National Institute of Allergy and Infectious Disease, National Institute of Health, Bethesda, Maryland, United States of America

Jason A. Greenbaum

Roles Resources, Writing – review & editing

Affiliation LJI Bioinformatics Core, La Jolla Institute for Immunology, La Jolla, California, United States of America

Leying Guan

Roles Supervision, Writing – review & editing

Affiliation Department of Biostatistics, Yale School of Public Health, New Haven, Connecticut, United States of America

Weikang Guan

Roles Writing – review & editing

Affiliation Department of Molecular Biology, School of Biological Sciences, University of California, San Diego, La Jolla, California, United States of America

Jeremy P. Gygi

Roles Writing – review & editing

Affiliation Program in Computational Biology & Bioinformatics, Yale University, New Haven, Connecticut, United States of America

Brendan Ha

Roles Writing – review & editing

Affiliation LJI Bioinformatics Core, La Jolla Institute for Immunology, La Jolla, California, United States of America

Joe Hou

Roles Writing – review & editing

Affiliation Vaccine and Infectious Disease Division, Fred Hutchinson Cancer Research Center, Seattle, Washington, United States of America

Jason Hsiao

Roles Writing – review & editing

Affiliation Department of Molecular Biology, School of Biological Sciences, University of California, San Diego, La Jolla, California, United States of America

Yunda Huang

Roles Writing – review & editing

Affiliations Vaccine and Infectious Disease Division, Fred Hutchinson Cancer Research Center, Seattle, Washington, United States of America, Department of Global Health, University of Washington, Seattle, Washington, United States of America

Rick Jansen

Roles Writing – review & editing

Affiliation Biostatistics Core, Masonic Cancer Center, University of Minnesota, Minneapolis, Minnesota, United States of America

Bhargob Kakoty

Roles Writing – review & editing

Affiliation Division of Biostatistics and Health Data Science, University of Minnesota, Minneapolis, Minnesota, United States of America

Zhiyu Kang

Roles Writing – review & editing

Affiliation Division of Biostatistics and Health Data Science, University of Minnesota, Minneapolis, Minnesota, United States of America

James J. Kobie

Roles Writing – review & editing

Affiliation Department of Medicine, Division of Infectious Diseases, University of Alabama at Birmingham, Birmingham, Alabama, United States of America

Mari Kojima

Roles Writing – original draft, Writing – review & editing

Affiliation Center for Vaccine Innovation, La Jolla Institute for Immunology, La Jolla, California, United States of America

Anna Konstorum

Roles Writing – review & editing

Affiliations Department of Pathology, Yale School of Medicine, New Haven, Connecticut, United States of America, Laboratory for Systems Biology, University of Florida, Gainesville, Florida, United States of America

Jiyeun Lee

Roles Methodology, Writing – review & editing

Affiliation Center for Vaccine Innovation, La Jolla Institute for Immunology, La Jolla, California, United States of America

Sloan A. Lewis

Roles Writing – review & editing

Affiliation Center for Vaccine Innovation, La Jolla Institute for Immunology, La Jolla, California, United States of America

Aixin Li

Roles Writing – review & editing

Affiliation Division of Epidemiology and Community Health, University of Minnesota, Minneapolis, Minnesota, United States of America

Eric F. Lock

Roles Writing – review & editing

Affiliation Division of Biostatistics and Health Data Science, University of Minnesota, Minneapolis, Minnesota, United States of America

Jarjapu Mahita

Roles Writing – original draft, Writing – review & editing

Affiliation Center for Vaccine Innovation, La Jolla Institute for Immunology, La Jolla, California, United States of America

Marcus Mendes

Roles Writing – review & editing

Affiliation Center for Vaccine Innovation, La Jolla Institute for Immunology, La Jolla, California, United States of America

Hailong Meng

Roles Writing – review & editing

Affiliation Department of Pathology, Yale School of Medicine, New Haven, Connecticut, United States of America

Aidan Neher

Roles Writing – review & editing

Affiliation Division of Biostatistics and Health Data Science, University of Minnesota, Minneapolis, Minnesota, United States of America

Somayeh Nili

Roles Methodology, Writing – review & editing

Affiliation Center for Vaccine Innovation, La Jolla Institute for Immunology, La Jolla, California, United States of America

Lars Rønn Olsen

Roles Writing – review & editing

Affiliation Department of Immunology and Microbiology, LEO Foundation Skin Immunology Research Center, University of Copenhagen, Copenhagen, Denmark

Shelby Orfield

Roles Methodology, Writing – original draft, Writing – review & editing

Affiliation Center for Vaccine Innovation, La Jolla Institute for Immunology, La Jolla, California, United States of America

James A. Overton

Roles Methodology, Writing – review & editing

Affiliation Knocean, Inc., Toronto, Canada

Nidhi Pai

Roles Writing – review & editing

Affiliation Division of Biostatistics and Health Data Science, University of Minnesota, Minneapolis, Minnesota, United States of America

Cokie Parker

Roles Writing – review & editing

Affiliation National Institute of Allergy and Infectious Diseases, National Institute of Health, Bethesda, Maryland, United States of America

Brian Qian

Roles Writing – review & editing

Affiliation Department of Molecular Biology, School of Biological Sciences, University of California, San Diego, La Jolla, California, United States of America

Mikkel Rasmussen

Roles Writing – review & editing

Affiliation Center for Vaccine Innovation, La Jolla Institute for Immunology, La Jolla, California, United States of America

Joaquin Reyna

Roles Writing – review & editing

Affiliations Center for Autoimmunity and Inflammation, La Jolla Institute for Immunology, La Jolla, California, United States of America, Bioinformatics and Systems Biology Graduate Program, University of California, San Diego, California, United States of America

Eve Richardson

Roles Writing – review & editing

Affiliation Center for Vaccine Innovation, La Jolla Institute for Immunology, La Jolla, California, United States of America

Sandra Safo

Roles Writing – review & editing

Affiliation Division of Biostatistics and Health Data Science, University of Minnesota, Minneapolis, Minnesota, United States of America

Josey Sorenson

Roles Writing – review & editing

Affiliation Division of Biostatistics and Health Data Science, University of Minnesota, Minneapolis, Minnesota, United States of America

Aparna Srinivasan

Roles Writing – review & editing

Affiliation Division of Biostatistics and Health Data Science, University of Minnesota, Minneapolis, Minnesota, United States of America

Nicola Thrupp

Roles Writing – review & editing

Affiliation Center for Vaccine Innovation, La Jolla Institute for Immunology, La Jolla, California, United States of America

Rashmi Tippalagama

Roles Writing – review & editing

Affiliation Center for Vaccine Innovation, La Jolla Institute for Immunology, La Jolla, California, United States of America

Raphael Trevizani

Roles Writing – review & editing

Affiliations Center for Vaccine Innovation, La Jolla Institute for Immunology, La Jolla, California, United States of America, Fundação Oswaldo Cruz, Fiocruz - Ceará, Brazil

Steffen Ventz

Roles Writing – review & editing

Affiliation Division of Biostatistics and Health Data Science, University of Minnesota, Minneapolis, Minnesota, United States of America

Jiuzhou Wang

Roles Writing – review & editing

Affiliation Division of Biostatistics and Health Data Science, University of Minnesota, Minneapolis, Minnesota, United States of America

Cheng-Chang Wu

Roles Writing – review & editing

Affiliation Division of Biostatistics and Health Data Science, University of Minnesota, Minneapolis, Minnesota, United States of America

Ferhat Ay

Roles Supervision, Writing – review & editing

Affiliations Department of Medicine, University of California San Diego, San Diego, California, United States of America, Center for Autoimmunity and Inflammation, La Jolla Institute for Immunology, La Jolla, California, United States of America, Bioinformatics and Systems Biology Graduate Program, University of California, San Diego, California, United States of America

Barry Grant

Roles Resources, Supervision, Writing – review & editing

Affiliation Department of Molecular Biology, School of Biological Sciences, University of California, San Diego, La Jolla, California, United States of America

Steven H. Kleinstein

Roles Supervision, Writing – review & editing

Affiliations Program in Computational Biology & Bioinformatics, Yale University, New Haven, Connecticut, United States of America, Department of Pathology, Yale School of Medicine, New Haven, Connecticut, United States of America

Bjoern Peters

Roles Conceptualization, Funding acquisition, Methodology, Supervision, Writing – original draft, Writing – review & editing

bpeters@lji.org

Affiliations Center for Vaccine Innovation, La Jolla Institute for Immunology, La Jolla, California, United States of America, Department of Medicine, University of California San Diego, San Diego, California, United States of America

Competing Interests

The authors have declared that no competing interests exist.