About the Authors

Gisela Gabernet

Contributed equally to this work with: Gisela Gabernet, Susanna Marquez

Roles Conceptualization, Formal analysis, Funding acquisition, Methodology, Software, Writing – original draft, Writing – review & editing

gisela.gabernet@yale.edu

Affiliations Department of Pathology, Yale School of Medicine, New Haven, Connecticut, United States of America, Quantitative Biology Center, Eberhard-Karls University of Tübingen, Tübingen, Germany

Susanna Marquez

Contributed equally to this work with: Gisela Gabernet, Susanna Marquez

Roles Conceptualization, Formal analysis, Methodology, Software, Writing – original draft, Writing – review & editing

Affiliation Department of Pathology, Yale School of Medicine, New Haven, Connecticut, United States of America

Robert Bjornson

Roles Methodology, Writing – review & editing

Affiliation Yale Center for Research Computing, New Haven, Connecticut, United States of America

Alexander Peltzer

Roles Software, Writing – review & editing

Affiliation Boehringer Ingelheim Pharma GmbH & Co. KG, Biberach, Germany

Hailong Meng

Roles Software, Writing – review & editing

Affiliation Department of Pathology, Yale School of Medicine, New Haven, Connecticut, United States of America

Edel Aron

Roles Software, Writing – review & editing

Affiliation Program in Computational Biology and Bioinformatics, Yale University, New Haven, Connecticut, United States of America

Noah Y. Lee

Roles Software, Writing – review & editing

Affiliation Program in Computational Biology and Bioinformatics, Yale University, New Haven, Connecticut, United States of America

Cole G. Jensen

Roles Software, Writing – review & editing

Affiliation Program in Computational Biology and Bioinformatics, Yale University, New Haven, Connecticut, United States of America

David Ladd

Roles Software, Writing – review & editing

Affiliation oNKo-Innate Pty Ltd, Melbourne, Victoria, Australia

Mark Polster

Roles Software, Writing – review & editing

Affiliations Quantitative Biology Center, Eberhard-Karls University of Tübingen, Tübingen, Germany, Department of Computer Science, Eberhard-Karls University of Tübingen, Tübingen, Germany, M3 Research Center, University Hospital, Tübingen, Germany

Friederike Hanssen

Roles Software, Writing – review & editing

Affiliations Quantitative Biology Center, Eberhard-Karls University of Tübingen, Tübingen, Germany, Department of Computer Science, Eberhard-Karls University of Tübingen, Tübingen, Germany, M3 Research Center, University Hospital, Tübingen, Germany

Simon Heumos

Roles Software, Writing – review & editing

Affiliations Quantitative Biology Center, Eberhard-Karls University of Tübingen, Tübingen, Germany, Department of Computer Science, Eberhard-Karls University of Tübingen, Tübingen, Germany, M3 Research Center, University Hospital, Tübingen, Germany

nf-core community

Membership of ‘nf-core community’ is provided in the Acknowledgements.

Gur Yaari

Roles Supervision, Writing – review & editing

Affiliation Faculty of Engineering, Bar Ilan University, Ramat Gan, Israel

Markus C. Kowarik

Roles Supervision, Writing – review & editing

Affiliations Department of Neurology and Stroke, Center for Neurology, Eberhard-Karls University of Tübingen, Tübingen, Germany, Hertie Institute for Clinical Brain Research, Eberhard-Karls University of Tübingen, Tübingen, Germany

Sven Nahnsen

Roles Funding acquisition, Supervision, Writing – original draft, Writing – review & editing

‡ These authors are joint senior authors on this work.

Affiliations Quantitative Biology Center, Eberhard-Karls University of Tübingen, Tübingen, Germany, Department of Computer Science, Eberhard-Karls University of Tübingen, Tübingen, Germany, M3 Research Center, University Hospital, Tübingen, Germany, Institute for Bioinformatics and Medical Informatics (IBMI), Eberhard-Karls University of Tübingen, Tübingen, Germany

Steven H. Kleinstein

Roles Funding acquisition, Methodology, Supervision, Writing – original draft, Writing – review & editing

‡ These authors are joint senior authors on this work.

Affiliations Department of Pathology, Yale School of Medicine, New Haven, Connecticut, United States of America, Program in Computational Biology and Bioinformatics, Yale University, New Haven, Connecticut, United States of America, Department of Immunobiology, Yale School of Medicine, New Haven, Connecticut, United States of America

Competing Interests

I have read the journal’s policy and the authors of this manuscript have the following competing interests: SHK receives consulting fees from Peraton. AP is an employee of Boehringer Ingelheim Pharma GmbH & Co KG and declares no conflict of interest. DL is an employee of oNKo-innate Pty Ltd and declares no conflict of interest. MCK has served on advisory boards and received speaker fees / travel grants from Merck, Sanofi-Genzyme, Novartis, Biogen, Janssen, Alexion, Celgene / Bristol-Myers Squibb and Roche. He has received research grants from Merck, Roche, Novartis, Sanofi-Genzyme and Celgene / Bristol-Myers Squibb. All other authors declare no conflicts of interest.