Distilling identifiable and interpretable dynamic models from biological data

Gemma Massonis; Alejandro F. Villaverde; Julio R. Banga

doi:10.1371/journal.pcbi.1011014

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Open Access

Peer-reviewed

Research Article

Distilling identifiable and interpretable dynamic models from biological data

Gemma Massonis,

Roles Data curation, Methodology, Software, Validation, Visualization, Writing – original draft

Affiliation Computational Biology Lab, MBG-CSIC (Spanish National Research Council), Pontevedra, Galicia, Spain

https://orcid.org/0000-0001-8740-825X

⨯
Alejandro F. Villaverde ,

Roles Conceptualization, Formal analysis, Funding acquisition, Investigation, Methodology, Project administration, Supervision, Writing – original draft, Writing – review & editing

* E-mail: afvillaverde@uvigo.gal (AFV); j.r.banga@csic.es (JRB)

Affiliations CITMAga, Santiago de Compostela, Galicia, Spain, Universidade de Vigo, Department of Systems and Control Engineering, Vigo, Galicia, Spain
⨯
Julio R. Banga

Roles Conceptualization, Formal analysis, Funding acquisition, Investigation, Methodology, Project administration, Resources, Supervision, Writing – original draft, Writing – review & editing

* E-mail: afvillaverde@uvigo.gal (AFV); j.r.banga@csic.es (JRB)

Affiliation Computational Biology Lab, MBG-CSIC (Spanish National Research Council), Pontevedra, Galicia, Spain

https://orcid.org/0000-0002-4245-0320

⨯

Distilling identifiable and interpretable dynamic models from biological data

Gemma Massonis,
Alejandro F. Villaverde,
Julio R. Banga

Published: October 18, 2023
https://doi.org/10.1371/journal.pcbi.1011014

About the Authors

Gemma Massonis

Roles Data curation, Methodology, Software, Validation, Visualization, Writing – original draft

Affiliation Computational Biology Lab, MBG-CSIC (Spanish National Research Council), Pontevedra, Galicia, Spain

https://orcid.org/0000-0001-8740-825X

Alejandro F. Villaverde

Roles Conceptualization, Formal analysis, Funding acquisition, Investigation, Methodology, Project administration, Supervision, Writing – original draft, Writing – review & editing

* E-mail: afvillaverde@uvigo.gal (AFV); j.r.banga@csic.es (JRB)

Affiliations CITMAga, Santiago de Compostela, Galicia, Spain, Universidade de Vigo, Department of Systems and Control Engineering, Vigo, Galicia, Spain

Julio R. Banga

Roles Conceptualization, Formal analysis, Funding acquisition, Investigation, Methodology, Project administration, Resources, Supervision, Writing – original draft, Writing – review & editing

* E-mail: afvillaverde@uvigo.gal (AFV); j.r.banga@csic.es (JRB)

Affiliation Computational Biology Lab, MBG-CSIC (Spanish National Research Council), Pontevedra, Galicia, Spain

https://orcid.org/0000-0002-4245-0320

Competing Interests

The authors have declared that no competing interests exist.

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Nonlinear dynamics
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Enzyme kinetics
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Glycolysis
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Algorithms
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Dynamical systems
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Cell differentiation
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Differential equations
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Machine learning
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