About the Authors

Alexis M. Thornton

Roles Conceptualization, Data curation, Formal analysis, Funding acquisition, Investigation, Methodology, Project administration, Software, Visualization, Writing – original draft, Writing – review & editing

Affiliations Department of Biomolecular Engineering, University of California Santa Cruz, Santa Cruz, California, United States of America, UCSC Genomics Institute, University of California Santa Cruz, Santa Cruz, California, United States of America

Lishan Fang

Roles Investigation, Validation, Visualization, Writing – review & editing

Affiliations Department of Medical Oncology, Dana-Farber Cancer Institute, Harvard Medical School, Boston, Massachusetts, United States of America, Broad Institute of Massachusetts Institute of Technology and Harvard, Cambridge, Massachusetts, United States of America, Department of Orthopedics, The Eight Affiliated Hospital of Sun Yat-sen University, Shenzhen, China

April Lo

Roles Data curation, Software, Writing – review & editing

Affiliation Fred Hutchinson Cancer Research Center, Seattle, Washington, United States of America

Maria McSharry

Roles Investigation, Writing – review & editing

Affiliation Fred Hutchinson Cancer Research Center, Seattle, Washington, United States of America

David Haan

Roles Formal analysis

Affiliations Department of Biomolecular Engineering, University of California Santa Cruz, Santa Cruz, California, United States of America, UCSC Genomics Institute, University of California Santa Cruz, Santa Cruz, California, United States of America

Casey O’Brien

Roles Investigation, Writing – review & editing

Affiliations Department of Medical Oncology, Dana-Farber Cancer Institute, Harvard Medical School, Boston, Massachusetts, United States of America, Broad Institute of Massachusetts Institute of Technology and Harvard, Cambridge, Massachusetts, United States of America

Alice H. Berger

Roles Conceptualization, Funding acquisition, Investigation, Methodology, Resources, Supervision, Writing – review & editing

‡ These authors are joint senior authors on this work.

Affiliation Fred Hutchinson Cancer Research Center, Seattle, Washington, United States of America

Marios Giannakis

Roles Conceptualization, Funding acquisition, Investigation, Methodology, Resources, Supervision, Validation, Writing – review & editing

‡ These authors are joint senior authors on this work.

Affiliations Department of Medical Oncology, Dana-Farber Cancer Institute, Harvard Medical School, Boston, Massachusetts, United States of America, Broad Institute of Massachusetts Institute of Technology and Harvard, Cambridge, Massachusetts, United States of America

Angela N. Brooks

Roles Conceptualization, Data curation, Formal analysis, Funding acquisition, Methodology, Project administration, Resources, Software, Supervision, Writing – original draft, Writing – review & editing

anbrooks@ucsc.edu

‡ These authors are joint senior authors on this work.

Affiliations Department of Biomolecular Engineering, University of California Santa Cruz, Santa Cruz, California, United States of America, UCSC Genomics Institute, University of California Santa Cruz, Santa Cruz, California, United States of America

Competing Interests

I have read the journal’s policy and the authors of this manuscript have the following competing interests: M.G. receives research funding from Bristol-Myers Squibb and Merck. A.N.B. is a consultant for Remix Therapeutics, Inc. All other authors have declared that no competing interests exist.