About the Authors

Leonard Schmiester

Contributed equally to this work with: Leonard Schmiester, Yannik Schälte

Roles Conceptualization, Methodology, Software, Writing – original draft, Writing – review & editing

Affiliations Institute of Computational Biology, Helmholtz Zentrum München—German Research Center for Environmental Health, Neuherberg, Germany, Center for Mathematics, Technische Universität München, Garching, Germany

Yannik Schälte

Contributed equally to this work with: Leonard Schmiester, Yannik Schälte

Roles Conceptualization, Methodology, Software, Writing – original draft, Writing – review & editing

Affiliations Institute of Computational Biology, Helmholtz Zentrum München—German Research Center for Environmental Health, Neuherberg, Germany, Center for Mathematics, Technische Universität München, Garching, Germany

Frank T. Bergmann

Roles Methodology, Software, Writing – review & editing

Affiliation BioQUANT/COS, Heidelberg University, Heidelberg, Germany

Tacio Camba

Roles Software, Writing – review & editing

Affiliations Department of Applied Mathematics II, University of Vigo, Vigo, Galicia, Spain, BioProcess Engineering Group, IIM-CSIC, Vigo, Galicia, Spain

Erika Dudkin

Roles Software, Writing – review & editing

Affiliation Faculty of Mathematics and Natural Sciences, University of Bonn, Bonn, Germany

Janine Egert

Roles Software, Writing – review & editing

Affiliations Faculty of Medicine and Medical Center, Institute of Medical Biometry and Statistics, University of Freiburg, Freiburg, Germany, Freiburg Center for Data Analysis and Modeling (FDM), University of Freiburg, Freiburg, Germany

Fabian Fröhlich

Roles Methodology, Software, Writing – review & editing

Affiliation Department of Systems Biology, Harvard Medical School, Boston, Massachusetts, USA

Lara Fuhrmann

Roles Software, Writing – review & editing

Affiliation Faculty of Mathematics and Natural Sciences, University of Bonn, Bonn, Germany

Adrian L. Hauber

Roles Software, Writing – review & editing

Affiliations Freiburg Center for Data Analysis and Modeling (FDM), University of Freiburg, Freiburg, Germany, Institute of Physics, University of Freiburg, Freiburg, Germany

Svenja Kemmer

Roles Software, Writing – review & editing

Affiliations Freiburg Center for Data Analysis and Modeling (FDM), University of Freiburg, Freiburg, Germany, Institute of Physics, University of Freiburg, Freiburg, Germany

Polina Lakrisenko

Roles Software, Writing – review & editing

Affiliations Institute of Computational Biology, Helmholtz Zentrum München—German Research Center for Environmental Health, Neuherberg, Germany, Center for Mathematics, Technische Universität München, Garching, Germany

Carolin Loos

Roles Software, Writing – review & editing

Affiliations Institute of Computational Biology, Helmholtz Zentrum München—German Research Center for Environmental Health, Neuherberg, Germany, Center for Mathematics, Technische Universität München, Garching, Germany, Ragon Institute of MGH, MIT and Harvard, Cambridge, Massachusetts, USA, Department of Biological Engineering, Massachusetts Institute of Technology, Cambridge, Massachusetts, USA

Simon Merkt

Roles Software, Writing – review & editing

Affiliation Faculty of Mathematics and Natural Sciences, University of Bonn, Bonn, Germany

Wolfgang Müller

Roles Software, Supervision, Writing – review & editing

Affiliation Heidelberg Institute for Theoretical Studies (HITS gGmbH), Heidelberg, Germany

Dilan Pathirana

Roles Software, Writing – review & editing

Affiliation Faculty of Mathematics and Natural Sciences, University of Bonn, Bonn, Germany

Elba Raimúndez

Roles Software, Writing – review & editing

Affiliations Institute of Computational Biology, Helmholtz Zentrum München—German Research Center for Environmental Health, Neuherberg, Germany, Center for Mathematics, Technische Universität München, Garching, Germany, Faculty of Mathematics and Natural Sciences, University of Bonn, Bonn, Germany

Lukas Refisch

Roles Software, Writing – review & editing

Affiliations Faculty of Medicine and Medical Center, Institute of Medical Biometry and Statistics, University of Freiburg, Freiburg, Germany, Freiburg Center for Data Analysis and Modeling (FDM), University of Freiburg, Freiburg, Germany

Marcus Rosenblatt

Roles Software, Writing – review & editing

Affiliations Freiburg Center for Data Analysis and Modeling (FDM), University of Freiburg, Freiburg, Germany, Institute of Physics, University of Freiburg, Freiburg, Germany

Paul L. Stapor

Roles Software, Writing – review & editing

Affiliations Institute of Computational Biology, Helmholtz Zentrum München—German Research Center for Environmental Health, Neuherberg, Germany, Center for Mathematics, Technische Universität München, Garching, Germany

Philipp Städter

Roles Software, Writing – review & editing

Affiliations Institute of Computational Biology, Helmholtz Zentrum München—German Research Center for Environmental Health, Neuherberg, Germany, Center for Mathematics, Technische Universität München, Garching, Germany

Dantong Wang

Roles Software, Writing – review & editing

Affiliations Institute of Computational Biology, Helmholtz Zentrum München—German Research Center for Environmental Health, Neuherberg, Germany, Center for Mathematics, Technische Universität München, Garching, Germany

Franz-Georg Wieland

Roles Software, Writing – review & editing

Affiliations Freiburg Center for Data Analysis and Modeling (FDM), University of Freiburg, Freiburg, Germany, Institute of Physics, University of Freiburg, Freiburg, Germany

Julio R. Banga

Roles Software, Supervision, Writing – review & editing

Affiliation BioProcess Engineering Group, IIM-CSIC, Vigo, Galicia, Spain

Jens Timmer

Roles Software, Supervision, Writing – review & editing

Affiliations Freiburg Center for Data Analysis and Modeling (FDM), University of Freiburg, Freiburg, Germany, Institute of Physics, University of Freiburg, Freiburg, Germany, Signalling Research Centres BIOSS and CIBSS, University of Freiburg, Freiburg, Germany

Alejandro F. Villaverde

Roles Software, Supervision, Writing – review & editing

Affiliation BioProcess Engineering Group, IIM-CSIC, Vigo, Galicia, Spain

Sven Sahle

Roles Software, Writing – review & editing

Affiliation BioQUANT/COS, Heidelberg University, Heidelberg, Germany

Clemens Kreutz

Roles Software, Supervision, Writing – review & editing

Affiliations Faculty of Medicine and Medical Center, Institute of Medical Biometry and Statistics, University of Freiburg, Freiburg, Germany, Freiburg Center for Data Analysis and Modeling (FDM), University of Freiburg, Freiburg, Germany, Signalling Research Centres BIOSS and CIBSS, University of Freiburg, Freiburg, Germany

Jan Hasenauer

Roles Conceptualization, Methodology, Software, Supervision, Writing – original draft, Writing – review & editing

jan.hasenauer@uni-bonn.de

‡JH and DW also contributed equally to this work.

Affiliations Institute of Computational Biology, Helmholtz Zentrum München—German Research Center for Environmental Health, Neuherberg, Germany, Center for Mathematics, Technische Universität München, Garching, Germany, Faculty of Mathematics and Natural Sciences, University of Bonn, Bonn, Germany

Daniel Weindl

Roles Conceptualization, Methodology, Software, Writing – original draft, Writing – review & editing

‡JH and DW also contributed equally to this work.

Affiliation Institute of Computational Biology, Helmholtz Zentrum München—German Research Center for Environmental Health, Neuherberg, Germany

Competing Interests

The authors have declared that no competing interests exist.