Base pair probability estimates improve the prediction accuracy of RNA non-canonical base pairs

Michael F. Sloma; David H. Mathews

doi:10.1371/journal.pcbi.1005827

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Open Access

Peer-reviewed

Research Article

Base pair probability estimates improve the prediction accuracy of RNA non-canonical base pairs

Michael F. Sloma,

Roles Conceptualization, Formal analysis, Investigation, Methodology, Software, Writing – original draft, Writing – review & editing

Affiliation Department of Biochemistry & Biophysics and Center for RNA Biology, University of Rochester Medical Center, Rochester, NY, United States of America

http://orcid.org/0000-0001-9730-6038

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David H. Mathews

Roles Conceptualization, Funding acquisition, Investigation, Software, Writing – review & editing

* E-mail: David_Mathews@urmc.rochester.edu

Affiliations Department of Biochemistry & Biophysics and Center for RNA Biology, University of Rochester Medical Center, Rochester, NY, United States of America, Department of Biostatistics & Computational Biology, University of Rochester Medical Center, Rochester, NY, United States of America

http://orcid.org/0000-0002-2907-6557

⨯

Base pair probability estimates improve the prediction accuracy of RNA non-canonical base pairs

Michael F. Sloma,
David H. Mathews

Published: November 6, 2017
https://doi.org/10.1371/journal.pcbi.1005827

About the Authors

Michael F. Sloma

Roles Conceptualization, Formal analysis, Investigation, Methodology, Software, Writing – original draft, Writing – review & editing

Affiliation Department of Biochemistry & Biophysics and Center for RNA Biology, University of Rochester Medical Center, Rochester, NY, United States of America

http://orcid.org/0000-0001-9730-6038

David H. Mathews

Roles Conceptualization, Funding acquisition, Investigation, Software, Writing – review & editing

* E-mail: David_Mathews@urmc.rochester.edu

Affiliations Department of Biochemistry & Biophysics and Center for RNA Biology, University of Rochester Medical Center, Rochester, NY, United States of America, Department of Biostatistics & Computational Biology, University of Rochester Medical Center, Rochester, NY, United States of America

http://orcid.org/0000-0002-2907-6557

Competing Interests

The authors have declared that no competing interests exist.

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RNA structure
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Nucleotides
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RNA structure prediction
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Algorithms
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Crystal structure
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Protein structure prediction
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Free energy
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Forecasting
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