Phylogenetic Reconstruction of Orthology, Paralogy, and Conserved Synteny for Dog and Human

Leo Goodstadt; Chris P Ponting

doi:10.1371/journal.pcbi.0020133

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Open Access

Peer-reviewed

Research Article

Phylogenetic Reconstruction of Orthology, Paralogy, and Conserved Synteny for Dog and Human

Leo Goodstadt ,

*To whom correspondence should be addressed. E-mail: leo.goodstadt@anat.ox.ac.uk

Affiliation Medical Research Council Functional Genetics Unit, University of Oxford, Department of Physiology, Anatomy, and Genetics, Oxford, United Kingdom
⨯
Chris P Ponting

Affiliation Medical Research Council Functional Genetics Unit, University of Oxford, Department of Physiology, Anatomy, and Genetics, Oxford, United Kingdom
⨯

Phylogenetic Reconstruction of Orthology, Paralogy, and Conserved Synteny for Dog and Human

Leo Goodstadt,
Chris P Ponting

Published: September 29, 2006
https://doi.org/10.1371/journal.pcbi.0020133

About the Authors

Leo Goodstadt

*To whom correspondence should be addressed. E-mail: leo.goodstadt@anat.ox.ac.uk

Affiliation Medical Research Council Functional Genetics Unit, University of Oxford, Department of Physiology, Anatomy, and Genetics, Oxford, United Kingdom

Chris P Ponting

Affiliation Medical Research Council Functional Genetics Unit, University of Oxford, Department of Physiology, Anatomy, and Genetics, Oxford, United Kingdom

Competing Interests

The authors have declared that no competing interests exist.

Author Contributions

LG conceived of, designed, and implemented PhyOP. CPP provided ideas and advice throughout the project and contributed to the genome analysis. LG and CPP wrote the paper together.

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Dogs
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Mammalian genomics
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Human genomics
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Animal phylogenetics
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Pseudogenes
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Gene prediction
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Sequence alignment
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Phylogenetic analysis
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