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Viral taxonomy

Metagenomic profiling of the insect-specific virome in non-urban mosquitoes (Culicidae: Culicinae) from Colombia’s Northern inter-Andean valleys

Andrés Gómez-Palacio, Howard Junca, Rafael J. Vivero-Gomez, Juan Suaza, Claudia X. Moreno-Herrera, Gloria Cadavid-Restrepo, Dietmar H. Pieper, Sandra Uribe

published 03 Sep 2025

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Evaluation of shotgun metagenomics as a diagnostic tool for infectious gastroenteritis

Kjersti Haugum, Anuradha Ravi, Jan Egil Afset, Christina Gabrielsen Ås

published 02 Sep 2025

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Host influence on the eukaryotic virome of sympatric mosquitoes and abundance of diverse viruses with a broad host range

Côme Morel, Patricia Gil, Antoni Exbrayat, Etienne Loire, Florian Charriat, Baptiste Prepoint, Celine Condachou, Geoffrey Gimonneau, Assane Gueye Fall, Biram Biteye, Momar Talla Seck, Marc Eloit, Serafin Gutierrez

published 30 Apr 2024

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The intestinal virome in children with cystic fibrosis differs from healthy controls

Michael J. Coffey, Ivan Low, Sacha Stelzer-Braid, Bernd Wemheuer, Millie Garg, Torsten Thomas, Adam Jaffe, William D. Rawlinson, Chee Y. Ooi

published 22 May 2020

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Machine learning using intrinsic genomic signatures for rapid classification of novel pathogens: COVID-19 case study

Gurjit S. Randhawa, Maximillian P. M. Soltysiak, Hadi El Roz, Camila P. E. de Souza, Kathleen A. Hill, Lila Kari

published 24 Apr 2020

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Characteristics of the tree shrew gut virome

Linxia Chen, Wenpeng Gu, Chenxiu Liu, Wenguang Wang, Na Li, Yang Chen, Caixia Lu, Xiaomei Sun, Yuanyuan Han, Dexuan Kuang, Pinfen Tong, Jiejie Dai

published 26 Feb 2019

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Screening human cell lines for viral infections applying RNA-Seq data analysis

Cord C. Uphoff, Claudia Pommerenke, Sabine A. Denkmann, Hans G. Drexler

published 10 Jan 2019

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The taxonomy of an Australian nodavirus isolated from mosquitoes

David Warrilow, Bixing Huang, Natalee D. Newton, Jessica J. Harrison, Karyn N. Johnson, Weng Kong Chow, Roy A. Hall, Jody Hobson-Peters

published 31 Dec 2018

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The analysis of the oral DNA virome reveals which viruses are widespread and rare among healthy young adults in Valencia (Spain)

Vicente Pérez-Brocal, Andrés Moya

published 08 Feb 2018

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Extension of the viral ecology in humans using viral profile hidden Markov models

Zurab Bzhalava, Emilie Hultin, Joakim Dillner

published 19 Jan 2018

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MetLab: An In Silico Experimental Design, Simulation and Analysis Tool for Viral Metagenomics Studies

Martin Norling, Oskar E. Karlsson-Lindsjö, Hadrien Gourlé, Erik Bongcam-Rudloff, Juliette Hayer

published 01 Aug 2016

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Transporting Ocean Viromes: Invasion of the Aquatic Biosphere

Yiseul Kim, Tiong Gim Aw, Joan B. Rose

published 07 Apr 2016

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Optimizing Viral Discovery in Bats

Cristin C. W. Young, Kevin J. Olival

published 11 Feb 2016

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