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Transcriptome analysis

Quantitative PCR provides a simple and accessible method for quantitative microbiota profiling

Ching Jian, Panu Luukkonen, [ ... ], Katri Korpela

Toxicogenomic and Phenotypic Analyses of Bisphenol-A Early-Life Exposure Toxicity in Zebrafish

Siew Hong Lam, Mya Myintzu Hlaing, [ ... ], Zhiyuan Gong

DNA Qualification Workflow for Next Generation Sequencing of Histopathological Samples

Michele Simbolo, Marisa Gottardi, [ ... ], Aldo Scarpa

Whole Transcriptome Sequencing Reveals Gene Expression and Splicing Differences in Brain Regions Affected by Alzheimer's Disease

Natalie A. Twine, Karolina Janitz, Marc R. Wilkins, Michal Janitz

Effects of GC Bias in Next-Generation-Sequencing Data on De Novo Genome Assembly

Yen-Chun Chen, Tsunglin Liu, [ ... ], Chi-Chuan Hwang

High-Resolution Transcriptome of Human Macrophages

Marc Beyer, Michael R. Mallmann, [ ... ], Joachim L. Schultze

Estimates of Genetic Differentiation Measured by F_ST Do Not Necessarily Require Large Sample Sizes When Using Many SNP Markers

Eva-Maria Willing, Christine Dreyer, Cock van Oosterhout

Systematic Comparison of Three Methods for Fragmentation of Long-Range PCR Products for Next Generation Sequencing

Ellen Knierim, Barbara Lucke, [ ... ], Dominik Seelow

Evaluating Methods for Isolating Total RNA and Predicting the Success of Sequencing Phylogenetically Diverse Plant Transcriptomes

Marc T. J. Johnson, Eric J. Carpenter, [ ... ], Gane Ka-Shu Wong

Fast Computation and Applications of Genome Mappability

Thomas Derrien, Jordi Estellé, [ ... ], Paolo Ribeca

Sequence Depth, Not PCR Replication, Improves Ecological Inference from Next Generation DNA Sequencing

Dylan P. Smith, Kabir G. Peay

Environmental Barcoding: A Next-Generation Sequencing Approach for Biomonitoring Applications Using River Benthos

Mehrdad Hajibabaei, Shadi Shokralla, [ ... ], Donald J. Baird

Development of Strategies for SNP Detection in RNA-Seq Data: Application to Lymphoblastoid Cell Lines and Evaluation Using 1000 Genomes Data

Emma M. Quinn, Paul Cormican, [ ... ], Derek W. Morris

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