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Structural genomics

Prediction of Protein-Destabilizing Polymorphisms by Manual Curation with Protein Structure

Craig Alan Gough, Keiichi Homma, Yumi Yamaguchi-Kabata, Makoto K. Shimada, Ranajit Chakraborty, Yasuyuki Fujii, Hisakazu Iwama, Shinsei Minoshima, Shigetaka Sakamoto, Yoshiharu Sato, Yoshiyuki Suzuki, Masahito Tada-Umezaki, Ken Nishikawa, Tadashi Imanishi, Takashi Gojobori

published 26 Nov 2012

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Genome-Wide Association Study Heterogeneous Cohort Homogenization via Subject Weight Knock-Down

André X. C. N. Valente, Joseph Zischkau, Joo Heon Shin, Yuan Gao, Abhijit Sarkar

published 29 Oct 2012

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The Apolipoprotein E (APOE) Gene Appears Functionally Monomorphic in Chimpanzees (Pan troglodytes)

Annick M. McIntosh, Calvin Bennett, Dara Dickson, Stephanie F. Anestis, David P. Watts, Timothy H. Webster, M. Babette Fontenot, Brenda J. Bradley

published 24 Oct 2012

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Recombination Form and Epidemiology of HIV-1 Unique Recombinant Strains Identified in Yunnan, China

Lin Li, Lili Chen, Shaomin Yang, Tianyi Li, Jianjian Li, Yongjian Liu, Lei Jia, Bihui Yang, Zuoyi Bao, Hanping Li, Xiaolin Wang, Daomin Zhuang, Siyang Liu, Jingyun Li

published 09 Oct 2012

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Three-Dimensional Genome Architecture Influences Partner Selection for Chromosomal Translocations in Human Disease

Jesse M. Engreitz, Vineeta Agarwala, Leonid A. Mirny

published 28 Sep 2012

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Two Goose-Type Lysozymes in Mytilus galloprovincialis: Possible Function Diversification and Adaptive Evolution

Qing Wang, Linbao Zhang, Jianmin Zhao, Liping You, Huifeng Wu

published 21 Sep 2012

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Ruler Arrays Reveal Haploid Genomic Structural Variation

P. Alexander Rolfe, Douglas A. Bernstein, Paula Grisafi, Gerald R. Fink, David K. Gifford

published 27 Aug 2012

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FunSAV: Predicting the Functional Effect of Single Amino Acid Variants Using a Two-Stage Random Forest Model

Mingjun Wang, Xing-Ming Zhao, Kazuhiro Takemoto, Haisong Xu, Yuan Li, Tatsuya Akutsu, Jiangning Song

published 24 Aug 2012

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Identification of Catalytic Residues Using a Novel Feature that Integrates the Microenvironment and Geometrical Location Properties of Residues

Lei Han, Yong-Jun Zhang, Jiangning Song, Ming S. Liu, Ziding Zhang

published 19 Jul 2012

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Protein Surface Matching by Combining Local and Global Geometric Information

Leif Ellingson, Jinfeng Zhang

published 17 Jul 2012

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The Fragmented Mitochondrial Ribosomal RNAs of Plasmodium falciparum

Jean E. Feagin, Maria Isabel Harrell, Jung C. Lee, Kevin J. Coe, Bryan H. Sands, Jamie J. Cannone, Germaine Tami, Murray N. Schnare, Robin R. Gutell

published 22 Jun 2012

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Accurate Prediction of Protein Structural Class

Xia-Yu Xia, Meng Ge, Zhi-Xin Wang, Xian-Ming Pan

published 19 Jun 2012

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How Many Protein-Protein Interactions Types Exist in Nature?

Leonardo Garma, Srayanta Mukherjee, Pralay Mitra, Yang Zhang

published 13 Jun 2012

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