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Shotgun sequencing

Complete Genome Sequence of the Biocontrol Strain Pseudomonas protegens Cab57 Discovered in Japan Reveals Strain-Specific Diversity of This Species

Kasumi Takeuchi, Naomi Noda, Nobutaka Someya

MetaMetaDB: A Database and Analytic System for Investigating Microbial Habitability

Ching-chia Yang, Wataru Iwasaki

The Genome Sequence of the Fungal Pathogen Fusarium virguliforme That Causes Sudden Death Syndrome in Soybean

Subodh K. Srivastava, Xiaoqiu Huang, [ ... ], Madan K. Bhattacharyya

32 species validation of a new Illumina paired-end approach for the development of microsatellites

Stacey L. Lance, Cara N. Love, [ ... ], Kenneth L. Jones

Metagenomic Insights into the Carbohydrate-Active Enzymes Carried by the Microorganisms Adhering to Solid Digesta in the Rumen of Cows

Lingling Wang, Ayat Hatem, [ ... ], Zhongtang Yu

NeSSM: A Next-Generation Sequencing Simulator for Metagenomics

Ben Jia, Liming Xuan, [ ... ], Chaochun Wei

Co-Enriching Microflora Associated with Culture Based Methods to Detect Salmonella from Tomato Phyllosphere

Andrea R. Ottesen, Antonio Gonzalez, [ ... ], James B. Pettengill

Surprising Prokaryotic and Eukaryotic Diversity, Community Structure and Biogeography of Ethiopian Soda Lakes

Anders Lanzén, Addis Simachew, [ ... ], Lise Øvreås

A Filtering Method to Generate High Quality Short Reads Using Illumina Paired-End Technology

A. Murat Eren, Joseph H. Vineis, Hilary G. Morrison, Mitchell L. Sogin

Copy Number Change of the NDM-1 Sequence in a Multidrug-Resistant Klebsiella pneumoniae Clinical Isolate

Tzu-Wen Huang, Te-Li Chen, [ ... ], Shih-Feng Tsai

Metagenomic Analysis of a Tropical Composting Operation at the São Paulo Zoo Park Reveals Diversity of Biomass Degradation Functions and Organisms

Layla Farage Martins, Luciana Principal Antunes, [ ... ], João Carlos Setubal

phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data

Paul J. McMurdie, Susan Holmes

Enhanced De Novo Assembly of High Throughput Pyrosequencing Data Using Whole Genome Mapping

Fatma Onmus-Leone, Jun Hang, [ ... ], Emil P. Lesho

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