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Sequence similarity searching

Prediction of Sphingosine protein-coding regions with a self adaptive spectral rotation method

Zhongwei Li, Yanan Guan, [ ... ], Hu Zhu

BlasterJS: A novel interactive JavaScript visualisation component for BLAST alignment results

Aitor Blanco-Míguez, Florentino Fdez-Riverola, Borja Sánchez, Anália Lourenço

De novo assembly of a transcriptome for the cricket Gryllus bimaculatus prothoracic ganglion: An invertebrate model for investigating adult central nervous system compensatory plasticity

Harrison P. Fisher, Micah G. Pascual, [ ... ], Hadley W. Horch

TopicalPdb: A database of topically delivered peptides

Deepika Mathur, Ayesha Mehta, [ ... ], Gajendra P. S. Raghava

Comparing fixed sampling with minimizer sampling when using k-mer indexes to find maximal exact matches

Meznah Almutairy, Eric Torng

Large-scale mapping of bioactive peptides in structural and sequence space

Agustina E. Nardo, M. Cristina Añón, Gustavo Parisi

A TALE-inspired computational screen for proteins that contain approximate tandem repeats

Malgorzata Perycz, Joanna Krwawicz, Matthias Bochtler

Tracing Technological Development Trajectories: A Genetic Knowledge Persistence-Based Main Path Approach

Hyunseok Park, Christopher L. Magee

GPU-Acceleration of Sequence Homology Searches with Database Subsequence Clustering

Shuji Suzuki, Masanori Kakuta, Takashi Ishida, Yutaka Akiyama

SW#db: GPU-Accelerated Exact Sequence Similarity Database Search

Matija Korpar, Martin Šošić, Dino Blažeka, Mile Šikić

Identification of Putative Nuclear Receptors and Steroidogenic Enzymes in Murray-Darling Rainbowfish (Melanotaenia fluviatilis) Using RNA-Seq and De Novo Transcriptome Assembly

Peter A. Bain, Alexie Papanicolaou, Anupama Kumar

COGNIZER: A Framework for Functional Annotation of Metagenomic Datasets

Tungadri Bose, Mohammed Monzoorul Haque, CVSK Reddy, Sharmila S. Mande

PATBox: A Toolbox for Classification and Analysis of P-Type ATPases

Dan Søndergaard, Christian Nørgaard Storm Pedersen

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