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Sequence motif analysis

Large-scale phylogenomic analysis suggests three ancient superclades of the WUSCHEL-RELATED HOMEOBOX transcription factor family in plants

Cheng-Chiang Wu, Fay-Wei Li, Elena M. Kramer

A combined strategy of neuropeptide prediction and tandem mass spectrometry identifies evolutionarily conserved ancient neuropeptides in the sea anemone Nematostella vectensis

Eisuke Hayakawa, Hiroshi Watanabe, [ ... ], Liliane Schoofs

Genome-wide identification and expression profile analysis of nuclear factor Y family genes in Sorghum bicolor L. (Moench)

P. Maheshwari, Divya Kummari, [ ... ], P. B. Kavi Kishor

DIpartite: A tool for detecting bipartite motifs by considering base interdependencies

Mohammad Vahed, Jun-ichi Ishihara, Hiroki Takahashi

Genome-wide analysis of sulfotransferase genes and their responses to abiotic stresses in Chinese cabbage (Brassica rapa L.)

Lu Jin, Ning Ouyang, [ ... ], Ying Ruan

A secreted WY-domain-containing protein present in European isolates of the oomycete Plasmopara viticola induces cell death in grapevine and tobacco species

Maud Combier, Edouard Evangelisti, [ ... ], Pere Mestre

Hiding in plain sight: New virus genomes discovered via a systematic analysis of fungal public transcriptomes

Kerrigan B. Gilbert, Emily E. Holcomb, Robyn L. Allscheid, James C. Carrington

Identification, expression, alternative splicing and functional analysis of pepper WRKY gene family in response to biotic and abiotic stresses

Jingyuan Zheng, Feng Liu, [ ... ], Yanqing Ma

Structure, function and dynamics in acyl carrier proteins

Rohit Farmer, Christopher Morton Thomas, Peter James Winn

Sequencing, genome analysis and prevalence of a cytorhabdovirus discovered in Carica papaya

Andrés X. Medina-Salguero, Juan F. Cornejo-Franco, [ ... ], Diego F. Quito-Avila

Deciphering regulatory DNA sequences and noncoding genetic variants using neural network models of massively parallel reporter assays

Rajiv Movva, Peyton Greenside, [ ... ], Anshul Kundaje

RNA structural analysis of the MYC mRNA reveals conserved motifs that affect gene expression

Collin A. O’Leary, Ryan J. Andrews, [ ... ], Walter N. Moss

Identification of inhibitors of an unconventional Trypanosoma brucei kinetochore kinase

Leah S. Torrie, Fabio Zuccotto, [ ... ], Manu De Rycker

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