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Sequence databases

Study of susceptibility to antibiotics and molecular characterization of high virulence Staphylococcus aureus strains isolated from a rural hospital in Ethiopia

Cristina Verdú-Expósito, Juan Romanyk, Juan Cuadros-González, Abraham TesfaMariam, José Luis Copa-Patiño, Jorge Pérez-Serrano, Juan Soliveri

published 12 Mar 2020

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Microbial resolution of whole genome shotgun and 16S amplicon metagenomic sequencing using publicly available NEON data

Kyle D. Brumfield, Anwar Huq, Rita R. Colwell, James L. Olds, Menu B. Leddy

published 13 Feb 2020

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Deep-sea amphipods around cobalt-rich ferromanganese crusts: Taxonomic diversity and selection of candidate species for connectivity analysis

Akira Iguchi, Miyuki Nishijima, Yuki Yoshioka, Aika Miyagi, Ryuichi Miwa, Yuichiro Tanaka, Shogo Kato, Takaaki Matsui, Yoshiaki Igarashi, Nobuyuki Okamoto, Atsushi Suzuki

published 06 Feb 2020

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Development of SSR markers in Paeonia based on De Novo transcriptomic assemblies

Dan He, Jiaorui Zhang, Xuefeng Zhang, Songlin He, Dongbo Xie, Yang Liu, Chaomei Li, Zheng Wang, Yiping Liu

published 30 Jan 2020

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All of gene expression (AOE): An integrated index for public gene expression databases

Hidemasa Bono

published 24 Jan 2020

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Repository-based plasmid design

Joshua J. Timmons, Doug Densmore

published 09 Jan 2020

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Increased performance of DNA metabarcoding of macroinvertebrates by taxonomic sorting

Kevin K. Beentjes, Arjen G. C. L. Speksnijder, Menno Schilthuizen, Marten Hoogeveen, Rob Pastoor, Berry B. van der Hoorn

published 16 Dec 2019

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Optimization of TripleTOF spectral simulation and library searching for confident localization of phosphorylation sites

Ayano Takai, Tomoya Tsubosaka, Yasuhiro Hirano, Naoki Hayakawa, Fumitaka Tani, Pekka Haapaniemi, Veronika Suni, Susumu Y. Imanishi

published 02 Dec 2019

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Bioinformatic analysis of a novel Echinococcus granulosus nuclear receptor with two DNA binding domains

Gabriela Alvite, Ximena Riera, Saira Cancela, Margot Paulino, Adriana Esteves

published 11 Nov 2019

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ProphET, prophage estimation tool: A stand-alone prophage sequence prediction tool with self-updating reference database

João L. Reis-Cunha, Daniella C. Bartholomeu, Abigail L. Manson, Ashlee M. Earl, Gustavo C. Cerqueira

published 02 Oct 2019

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Genomic characterisation of perinatal Western Australian Streptococcus agalactiae isolates

Lucy L. Furfaro, Barbara J. Chang, Charlene M. Kahler, Matthew S. Payne

published 02 Oct 2019

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DNA barcoding of coastal ray-finned fishes in Vietnam

Pham The Thu, Wen-Chien Huang, Tak-Kei Chou, Nguyen Van Quan, Pham Van Chien, Fan Li, Kwang-Tsao Shao, Te-Yu Liao

published 19 Sep 2019

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Using DNA barcoding to improve invasive pest identification at U.S. ports-of-entry

Mary J. L. Madden, Robert G. Young, John W. Brown, Scott E. Miller, Andrew J. Frewin, Robert H. Hanner

published 17 Sep 2019

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