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Sequence databases

Development of SSR markers in Paeonia based on De Novo transcriptomic assemblies

Dan He, Jiaorui Zhang, Xuefeng Zhang, Songlin He, Dongbo Xie, Yang Liu, Chaomei Li, Zheng Wang, Yiping Liu

published 30 Jan 2020

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All of gene expression (AOE): An integrated index for public gene expression databases

Hidemasa Bono

published 24 Jan 2020

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Repository-based plasmid design

Joshua J. Timmons, Doug Densmore

published 09 Jan 2020

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Increased performance of DNA metabarcoding of macroinvertebrates by taxonomic sorting

Kevin K. Beentjes, Arjen G. C. L. Speksnijder, Menno Schilthuizen, Marten Hoogeveen, Rob Pastoor, Berry B. van der Hoorn

published 16 Dec 2019

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Optimization of TripleTOF spectral simulation and library searching for confident localization of phosphorylation sites

Ayano Takai, Tomoya Tsubosaka, Yasuhiro Hirano, Naoki Hayakawa, Fumitaka Tani, Pekka Haapaniemi, Veronika Suni, Susumu Y. Imanishi

published 02 Dec 2019

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Bioinformatic analysis of a novel Echinococcus granulosus nuclear receptor with two DNA binding domains

Gabriela Alvite, Ximena Riera, Saira Cancela, Margot Paulino, Adriana Esteves

published 11 Nov 2019

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ProphET, prophage estimation tool: A stand-alone prophage sequence prediction tool with self-updating reference database

João L. Reis-Cunha, Daniella C. Bartholomeu, Abigail L. Manson, Ashlee M. Earl, Gustavo C. Cerqueira

published 02 Oct 2019

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Genomic characterisation of perinatal Western Australian Streptococcus agalactiae isolates

Lucy L. Furfaro, Barbara J. Chang, Charlene M. Kahler, Matthew S. Payne

published 02 Oct 2019

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DNA barcoding of coastal ray-finned fishes in Vietnam

Pham The Thu, Wen-Chien Huang, Tak-Kei Chou, Nguyen Van Quan, Pham Van Chien, Fan Li, Kwang-Tsao Shao, Te-Yu Liao

published 19 Sep 2019

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Using DNA barcoding to improve invasive pest identification at U.S. ports-of-entry

Mary J. L. Madden, Robert G. Young, John W. Brown, Scott E. Miller, Andrew J. Frewin, Robert H. Hanner

published 17 Sep 2019

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Phylogenetic microbiota profiling in fecal samples depends on combination of sequencing depth and choice of NGS analysis method

Sukithar K. Rajan, Mårten Lindqvist, Robert Jan Brummer, Ida Schoultz, Dirk Repsilber

published 17 Sep 2019

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Faecalibacterium diversity in dairy cow milk

Keith W. Savin, Jody Zawadzki, Martin J. Auldist, Jianghui Wang, Doris Ram, Simone Rochfort, Benjamin G. Cocks

published 16 Aug 2019

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Assessment of BOLD and GenBank – Their accuracy and reliability for the identification of biological materials

Kelly A. Meiklejohn, Natalie Damaso, James M. Robertson

published 19 Jun 2019

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