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Sequence databases

Figures of merit and statistics for detecting faulty species identification with DNA barcodes: A case study in Ramaria and related fungal genera

María P. Martín, Pablo P. Daniëls, David Erickson, John L. Spouge

De novo sequence assembly requires bioinformatic checking of chimeric sequences

Laila Sara Arroyo Mühr, Camilla Lagheden, [ ... ], Joakim Dillner

Evidence for contamination as the origin for bacteria found in human placenta rather than a microbiota

Rémi Gschwind, Thierry Fournier, [ ... ], Sandra Wydau-Dematteis

The utility of DNA barcodes to confirm the identification of palm collections in botanical gardens

Duc-Thanh Le, Yu-Qu Zhang, [ ... ], Xue-Jun Ge

Classification of 16S rRNA reads is improved using a niche-specific database constructed by near-full length sequencing

Phillip R. Myer, Tara G. McDaneld, [ ... ], Timothy P. L. Smith

Evaluation of variant calling for cpn60 barcode sequence-based microbiome profiling

Sarah J. Vancuren, Scott J. Dos Santos, Janet E. Hill, the Maternal Microbiome Legacy Project Team

Sharpening the DNA barcoding tool through a posteriori taxonomic validation: The case of Longitarsus flea beetles (Coleoptera: Chrysomelidae)

Daniele Salvi, Emanuele Berrilli, Paola D’Alessandro, Maurizio Biondi

Multifaceted analysis of training and testing convolutional neural networks for protein secondary structure prediction

Maxim Shapovalov, Roland L. Dunbrack Jr., Slobodan Vucetic

Genetic variability of human adenovirus type 7 circulating in mainland China

Ru Cai, Naiying Mao, [ ... ], Wenbo Xu

OdoBD: An online database for the dragonflies and damselflies of Bangladesh

Md Nur Ahad Shah, Md Kawsar Khan

Study of susceptibility to antibiotics and molecular characterization of high virulence Staphylococcus aureus strains isolated from a rural hospital in Ethiopia

Cristina Verdú-Expósito, Juan Romanyk, [ ... ], Juan Soliveri

Microbial resolution of whole genome shotgun and 16S amplicon metagenomic sequencing using publicly available NEON data

Kyle D. Brumfield, Anwar Huq, [ ... ], Menu B. Leddy

Deep-sea amphipods around cobalt-rich ferromanganese crusts: Taxonomic diversity and selection of candidate species for connectivity analysis

Akira Iguchi, Miyuki Nishijima, [ ... ], Atsushi Suzuki

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