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Sequence databases

Molecular and morphological survey of Lamiaceae species in converted landscapes in Sumatra

Caitriona Brady Halmschlag, Carina Carneiro de Melo Moura, Fabian Brambach, Iskandar Z. Siregar, Oliver Gailing

published 15 Dec 2022

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Rapid visual Candidatus Liberibacter asiaticus detection (citrus greening disease) using simple alkaline heat DNA lysis followed by loop-mediated isothermal amplification coupled hydroxynaphthol blue (AL-LAMP-HNB) for potential local use

Natkamol Thoraneenitiyan, Ilada Choopara, Suphachai Nuanualsuwan, Sirirat Kokpol, Naraporn Somboonna

published 25 Oct 2022

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Drastic reduction of false positive species in samples of insects by intersecting the default output of two popular metagenomic classifiers

Lidia Garrido-Sanz, Miquel Àngel Senar, Josep Piñol

published 25 Oct 2022

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In silico functional annotation of hypothetical proteins from the Bacillus paralicheniformis strain Bac84 reveals proteins with biotechnological potentials and adaptational functions to extreme environments

Md. Atikur Rahman, Uzma Habiba Heme, Md. Anowar Khasru Parvez

published 13 Oct 2022

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Mitochondrial DNA barcoding of mosquito species (Diptera: Culicidae) in Thailand

Tanawat Chaiphongpachara, Tanasak Changbunjong, Sedthapong Laojun, Teerayoot Nutepsu, Nantana Suwandittakul, Kewarin Kuntawong, Suchada Sumruayphol, Jiraporn Ruangsittichai

published 22 Sep 2022

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Next generation biosecurity: Towards genome based identification to prevent spread of agronomic pests and pathogens using nanopore sequencing

Jürg E. Frey, Beatrice Frey, Daniel Frei, Simon Blaser, Morgan Gueuning, Andreas Bühlmann

published 25 Jul 2022

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TextFormats: Simplifying the definition and parsing of text formats in bioinformatics

Giorgio Gonnella

published 26 May 2022

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PltRNAdb: Plant transfer RNA database

Morad M. Mokhtar, Achraf EL Allali

published 23 May 2022

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Characterizing the secret diets of siphonophores (Cnidaria: Hydrozoa) using DNA metabarcoding

Alejandro Damian-Serrano, Elizabeth D. Hetherington, C. Anela Choy, Steven H. D. Haddock, Alexandra Lapides, Casey W. Dunn

published 20 May 2022

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Direct assessment of possible mutations in the 23S rRNA gene encoding macrolide resistance in Chlamydia trachomatis

J. M. van Niekerk, I. H. M. van Loo, M. Lucchesi, S. A. Morré, C. J. P. A. Hoebe, N. H. T. M. Dukers-Muijrers, P. F. G. Wolffs

published 10 May 2022

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Isolation, identification, and whole-genome sequencing of high-yield protease bacteria from Daqu of ZhangGong Laojiu

Yanbo Liu, Junying Fu, Linlin Wang, Zhijun Zhao, Huihui Wang, Suna Han, Xiyu Sun, Chunmei Pan

published 26 Apr 2022

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The predictive potential of different molecular markers linked to amikacin susceptibility phenotypes in Pseudomonas aeruginosa

Wedad M. Nageeb, Helal F. Hetta

published 25 Apr 2022

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Molecular and in silico typing of the lipooligosaccharide biosynthesis gene cluster in Campylobacter jejuni and Campylobacter coli

Amber Hameed, Julian M. Ketley, Alexandra Woodacre, Lee R. Machado, Gemma L. Marsden

published 31 Mar 2022

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