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Sequence databases

PyKleeBarcode: Enabling representation of the whole animal kingdom in information space

Wandrille Duchemin, David S. Thaler

Introducing an rbcL and a trnL reference library to aid in the metabarcoding analysis of foraged plants from two semi-arid eastern South African savanna bioregions

Danielle Botha, Mornè du Plessis, Frances Siebert, Sandra Barnard

Taxonomic identification accuracy from BOLD and GenBank databases using over a thousand insect DNA barcodes from Colombia

Nathalie Baena-Bejarano, Catalina Reina, [ ... ], Mailyn A. Gonzalez

Multigene typing of Giardia Duodenalis isolated from tuberculosis and non-tuberculosis subjects

Hanieh Mohammad Rahimi, Ehsan Javanmard, [ ... ], Hamed Mirjalali

Reliability of species detection in 16S microbiome analysis: Comparison of five widely used pipelines and recommendations for a more standardized approach

Andreas Hiergeist, Jean Ruelle, Stefan Emler, André Gessner

Optimization and application of non-native Phragmites australis transcriptome assemblies

Feng Tao, Chuanzhu Fan, [ ... ], Edward M. Golenberg

Classification of bacterial plasmid and chromosome derived sequences using machine learning

Xiaohui Zou, Marcus Nguyen, [ ... ], James J. Davis

Molecular and morphological survey of Lamiaceae species in converted landscapes in Sumatra

Caitriona Brady Halmschlag, Carina Carneiro de Melo Moura, [ ... ], Oliver Gailing

Rapid visual Candidatus Liberibacter asiaticus detection (citrus greening disease) using simple alkaline heat DNA lysis followed by loop-mediated isothermal amplification coupled hydroxynaphthol blue (AL-LAMP-HNB) for potential local use

Natkamol Thoraneenitiyan, Ilada Choopara, [ ... ], Naraporn Somboonna

Drastic reduction of false positive species in samples of insects by intersecting the default output of two popular metagenomic classifiers

Lidia Garrido-Sanz, Miquel Àngel Senar, Josep Piñol

In silico functional annotation of hypothetical proteins from the Bacillus paralicheniformis strain Bac84 reveals proteins with biotechnological potentials and adaptational functions to extreme environments

Md. Atikur Rahman, Uzma Habiba Heme, Md. Anowar Khasru Parvez

Mitochondrial DNA barcoding of mosquito species (Diptera: Culicidae) in Thailand

Tanawat Chaiphongpachara, Tanasak Changbunjong, [ ... ], Jiraporn Ruangsittichai

Next generation biosecurity: Towards genome based identification to prevent spread of agronomic pests and pathogens using nanopore sequencing

Jürg E. Frey, Beatrice Frey, [ ... ], Andreas Bühlmann

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