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Sequence databases

Comparative Metaproteomics and Diversity Analysis of Human Intestinal Microbiota Testifies for Its Temporal Stability and Expression of Core Functions

Carolin A. Kolmeder, Mark de Been, Janne Nikkilä, Ilja Ritamo, Jaana Mättö, Leena Valmu, Jarkko Salojärvi, Airi Palva, Anne Salonen, Willem M. de Vos

published 18 Jan 2012

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Microarray-Based Transcriptomic Analysis of Differences between Long-Term Gregarious and Solitarious Desert Locusts

Liesbeth Badisco, Swidbert R. Ott, Stephen M. Rogers, Thomas Matheson, Dries Knapen, Lucia Vergauwen, Heleen Verlinden, Elisabeth Marchal, Matt R. J. Sheehy, Malcolm Burrows, Jozef Vanden Broeck

published 23 Nov 2011

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Strategies for Metagenomic-Guided Whole-Community Proteomics of Complex Microbial Environments

Brandi L. Cantarel, Alison R. Erickson, Nathan C. VerBerkmoes, Brian K. Erickson, Patricia A. Carey, Chongle Pan, Manesh Shah, Emmanuel F. Mongodin, Janet K. Jansson, Claire M. Fraser-Liggett, Robert L. Hettich

published 23 Nov 2011

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Characterizing the Escherichia coli O157:H7 Proteome Including Protein Associations with Higher Order Assemblies

Rembert Pieper, Quanshun Zhang, David J. Clark, Shih-Ting Huang, Moo-Jin Suh, John C. Braisted, Samuel H. Payne, Robert D. Fleischmann, Scott N. Peterson, Saul Tzipori

published 07 Nov 2011

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Exploring the Diversity of Gardnerella vaginalis in the Genitourinary Tract Microbiota of Monogamous Couples Through Subtle Nucleotide Variation

A. Murat Eren, Marcela Zozaya, Christopher M. Taylor, Scot E. Dowd, David H. Martin, Michael J. Ferris

published 25 Oct 2011

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Plasmid Metagenome Reveals High Levels of Antibiotic Resistance Genes and Mobile Genetic Elements in Activated Sludge

Tong Zhang, Xu-Xiang Zhang, Lin Ye

published 10 Oct 2011

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GENE-Counter: A Computational Pipeline for the Analysis of RNA-Seq Data for Gene Expression Differences

Jason S. Cumbie, Jeffrey A. Kimbrel, Yanming Di, Daniel W. Schafer, Larry J. Wilhelm, Samuel E. Fox, Christopher M. Sullivan, Aron D. Curzon, James C. Carrington, Todd C. Mockler, Jeff H. Chang

published 06 Oct 2011

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Substrate Type Determines Metagenomic Profiles from Diverse Chemical Habitats

Thomas C. Jeffries, Justin R. Seymour, Jack A. Gilbert, Elizabeth A. Dinsdale, Kelly Newton, Sophie S. C. Leterme, Ben Roudnew, Renee J. Smith, Laurent Seuront, James G. Mitchell

published 23 Sep 2011

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CDinFusion – Submission-Ready, On-Line Integration of Sequence and Contextual Data

Wolfgang Hankeln, Norma Johanna Wendel, Jan Gerken, Jost Waldmann, Pier Luigi Buttigieg, Ivaylo Kostadinov, Renzo Kottmann, Pelin Yilmaz, Frank Oliver Glöckner

published 13 Sep 2011

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DNA Barcode Sequence Identification Incorporating Taxonomic Hierarchy and within Taxon Variability

Damon P. Little

published 16 Aug 2011

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Revealing Natural Relationships among Arbuscular Mycorrhizal Fungi: Culture Line BEG47 Represents Diversispora epigaea, Not Glomus versiforme

Arthur Schüßler, Manuela Krüger, Christopher Walker

published 11 Aug 2011

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Generation, Annotation and Analysis of First Large-Scale Expressed Sequence Tags from Developing Fiber of Gossypium barbadense L

Daojun Yuan, Lili Tu, Xianlong Zhang

published 28 Jul 2011

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Molecular Identification of Bacteria by Total Sequence Screening: Determining the Cause of Death in Ancient Human Subjects

Catherine Thèves, Alice Senescau, Stefano Vanin, Christine Keyser, François Xavier Ricaut, Anatoly N. Alekseev, Henri Dabernat, Bertrand Ludes, Richard Fabre, Eric Crubézy

published 13 Jul 2011

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