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Sequence databases

Use of 16S rRNA Gene for Identification of a Broad Range of Clinically Relevant Bacterial Pathogens

Ramya Srinivasan, Ulas Karaoz, [ ... ], Susan V. Lynch

Conservative Fragments in Bacterial 16S rRNA Genes and Primer Design for 16S Ribosomal DNA Amplicons in Metagenomic Studies

Yong Wang, Pei-Yuan Qian

DNA Barcoding the Native Flowering Plants and Conifers of Wales

Natasha de Vere, Tim C. G. Rich, [ ... ], Mike J. Wilkinson

High-Coverage ITS Primers for the DNA-Based Identification of Ascomycetes and Basidiomycetes in Environmental Samples

Hirokazu Toju, Akifumi S. Tanabe, Satoshi Yamamoto, Hirotoshi Sato

Characterization of the 18S rRNA Gene for Designing Universal Eukaryote Specific Primers

Kenan Hadziavdic, Katrine Lekang, [ ... ], Christofer Troedsson

Strengths and Limitations of 16S rRNA Gene Amplicon Sequencing in Revealing Temporal Microbial Community Dynamics

Rachel Poretsky, Luis M. Rodriguez-R, [ ... ], Konstantinos T. Konstantinidis

A Comprehensive Evaluation of PCR Primers to Amplify the nifH Gene of Nitrogenase

John Christian Gaby, Daniel H. Buckley

Taxonomic Classification of Bacterial 16S rRNA Genes Using Short Sequencing Reads: Evaluation of Effective Study Designs

Orna Mizrahi-Man, Emily R. Davenport, Yoav Gilad

A Method for Studying Protistan Diversity Using Massively Parallel Sequencing of V9 Hypervariable Regions of Small-Subunit Ribosomal RNA Genes

Linda A. Amaral-Zettler, Elizabeth A. McCliment, Hugh W. Ducklow, Susan M. Huse

Absence of Ancient DNA in Sub-Fossil Insect Inclusions Preserved in ‘Anthropocene’ Colombian Copal

David Penney, Caroline Wadsworth, [ ... ], Terence A. Brown

Fast Identification and Removal of Sequence Contamination from Genomic and Metagenomic Datasets

Robert Schmieder, Robert Edwards

16S rRNA gene sequencing and healthy reference ranges for 28 clinically relevant microbial taxa from the human gut microbiome

Daniel E. Almonacid, Laurens Kraal, [ ... ], Zachary S. Apte

Identifying Canadian Freshwater Fishes through DNA Barcodes

Nicolas Hubert, Robert Hanner, [ ... ], Louis Bernatchez

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