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Sequence databases

CoSMIC: A hybrid approach for large-scale, high-resolution microbial profiling of novel niches

Maor Knafo, Shahar Rezenman, Tal Idan, Michael Elgart, Shlomi Dagan, Vered Zavaro, Ziv Reich, Ruti Kapon, Dagan Sade, Noam Shental

published 27 Jan 2026

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Megabarcoding dark taxa – Assessing the utility of mass DNA barcoding for phorid fly species discovery

Jiri Vihavainen, Niina Kiljunen, Pekka Pohjola, Jaclyn McKeown, Eveliina Oinonen, Marko Mutanen, Jaakko Pohjoismäki

published 02 Dec 2025

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eDNA reveals spatial differences in species composition of protected rockfishes

Stephanie A. Matthews, Olivia M. Scott, Meredith V. Everett, Megan R. Shaffer, Elizabeth Andruszkiewicz Allan, Andrew O. Shelton, Gregory D. Williams, Abigail Wells, Krista M. Nichols, Ryan P. Kelly

published 01 Dec 2025

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Genome-wide identification and functional characterization of NPR1-like genes in Actinidia deliciosa

Weimin Zhong, Yuexia Wang, Shiming Han, Jihong Dong, Yumei Fang, Xiaoling Xu, Muhammad Umar Rasheed, Aiman Malik, Qurban Ali, Muhammad Ashfaq, Jia Zhou

published 13 Nov 2025

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Rapid on-site universal vertebrate species identification via multi-barcode nanopore sequencing

Emily C. Patterson, Sandrella Morrison-Lanjouw, Mark A. Jobling, Jon H. Wetton

published 11 Nov 2025

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Exploring the genetic landscape of the Copper Homeostasis and Silver Resistance Island (CHASRI) in Salmonella enterica

Julie Haendiges, Eric W. Brown, Christina Ferreira, Maria Hoffmann, Elizabeth Reed, Jie Zheng, Rohan Tikekar

published 03 Nov 2025

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DNA barcoding for elasmobranch diversity assessment in Thailand: Its advantages and limitations

Jenjit Khudamrongsawat, Tassapon Krajangdara, Thadsin Panithanarak, Ratima Karuwancharoen, Wanlada Klangnurak, Pattarapon Promnun, Wansuk Senanan

published 31 Oct 2025

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Environmental DNA from peck marks shows potential for non‑invasive monitoring of woodpeckers

Muhammad Bilal Sharif, Björn Ferry, Jérôme Fuchs, Bodil Cronholm, Peter D. Heintzman, Love Dalén

published 20 Aug 2025

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Global genetic diversity of Infectious Salmon Anemia Virus (ISAV) a scoping review protocol

Persia Carol Thapa, Ahsan Raquib, Kim Mears, Javier Sanchez, Sonja Saksida, Keith Larry Hammell, Krishna Kumar Thakur

published 17 Jun 2025

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A PCR primer design method for identifying spider mite species using k-mer counting

Tomoko Matsuda, Hironori Sakamoto, Takumi Kayukawa, Yasuki Kitashima, Toshinori Kozaki, Tetsuo Gotoh

published 09 Jun 2025

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Detection of Deltacoronavirus in environmental fecal samples from seabirds in the Saint Peter and Saint Paul Archipelago, central equatorial Atlantic Ocean

Fernanda Gomes, Alexandre Freitas da Silva, Tatiana Prado, Marina Galvão Bueno, Luciana Appolinario, Patrícia Soares Flores, Paola Cristina Resende, Marilda Siqueira, Leonardo Corrêa, Martha Brandão, Jose Reck, Gabriel Luz Wallau, Maria Ogrzewalska

published 03 Jun 2025

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Identification of Large Japanese field mouse Apodemus speciosus food plant resources in an industrial green space using DNA metabarcoding

Taichi Fujii, Hirokazu Kawamoto, Tomoyasu Shirako, Masatoshi Nakamura, Motoyasu Minami

published 24 Apr 2025

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Combatting antibiotic resistance in Gardnerella vaginalis: A comparative in silico investigation for drug target identification

Rabbia Riaz, Kanwal Khan, Saltanat Aghayeva, Reaz Uddin

published 12 Mar 2025

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