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Sequence alignment

Accurate quantification of spliced and unspliced transcripts for single-cell RNA sequencing with tidesurf

Jan T. Schleicher, Doreen Klingler, Manfred Claassen

published 17 Aug 2026

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F-squares over cellular automata

Joanne Hall, Kerri Morgan, Stella Stylianou, Vindya Warnakulasooriyage

published 12 Aug 2026

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Bridging clinical and computational assessments: Standardizing kinematic reporting in modified mallet scale movements

Ali İmran Yalçın, Oğuz Faik Seven, Merve Sarıipek, Semra Topuz, Mehmet Arif Adli, Tüzün Fırat

published 10 Aug 2026

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ProteoMapper: Alignment-aware identification and quantitative analysis of contextual motif–domain patterns in protein families

Sifullah Mahmud Sefa, Joyeeta Sarkar, Arif Hasan Khan Robin, Machbah Uddin

published 10 Aug 2026

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Efficient fine-tuning of large-scale vision-language models for visual marketing analysis: From brand logo detection to aesthetic preference prediction

Suxiang Qin, Songwen Wei

published 07 Aug 2026

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Structural analysis of recombinant AAV vector genomes at single-molecule resolution

David Rouleau, Dimpal Lata, Serena Dollive, Robert E. Bruccoleri, Laura Van Lieshout, Diane Golebiowski, Ifeyinwa Iwuchukwu

published 30 Jul 2026

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Evaluating the cultural alignment of multilingual LLMs in typical Japanese workplace scenarios

Zhiwei Gao, Nobuyuki Shimizu, Sumio Fujita, Shaowen Peng, Shoko Wakamiya, Eiji Aramaki

published 27 Jul 2026

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An approach of state-of-charge prediction for lithium-ion batteries using hybrid Pyraformer-LSTM learning network

Xianbin Wang, Liping Zhang, Qihua Fan, Yiyin Hu, Jian Zhang, Huimin Chen

published 24 Jul 2026

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Textual overlap rather than domain alignment: A comparative study of fine-tuning strategies for specialised machine translation with large language models

Lixue Yang, Jiaxin Zhu, Zengxin Zhang

published 20 Jul 2026

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Exploration of neuropeptides to identify potential target for regulating feeding behavior and development in Eurygaster integriceps

Mehrbanoo Kazemi Alamouti, Mohammad Majdi, Reza Talebi, Mehdi Dastranj, Aziz Sheikhigarjan, Mohsen Mardi, Alireza Bandani, Zahra Ghorbanzadeh, Ghasem Hosseini Salekdeh, Mohammad Reza Ghaffari

published 17 Jul 2026

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What topological and geometric structure do biological foundation models learn? Evidence from 141 hypotheses

Ihor Kendiukhov

published 17 Jul 2026

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A local sequence alignment approach to recognizing fixed poetic forms across languages

Petr Plecháč, Artjoms Šeļa

published 14 Jul 2026

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Genome-wide characterization of copy number variants and their functional relevance in indigenous draught cattle of South Asia

Tafara Kundai Mavunga, Johann Sölkner, Gábor Mészáros, Maano Bryton Malima, Rudolf Pichler, Saravanan Ramasamy, Loku Galappattige Sampath Lokugalappatti, Ei Thandar, Menghak Phem, Farai Catherine Muchadeyi, Yosra Ressaissi, Mario Barbato, Kathiravan Periasamy

published 13 Jul 2026

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