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Sequence alignment

Formation of human long intergenic non-coding RNA genes, pseudogenes, and protein genes: Ancestral sequences are key players

Nicholas Delihas

Genomic structure and transcript analysis of the Rapid Alkalinization Factor (RALF) gene family during host-pathogen crosstalk in Fragaria vesca and Fragaria x ananassa strawberry

Francesca Negrini, Kevin O’Grady, [ ... ], Elena Baraldi

Sergentomyia schwetzi: Salivary gland transcriptome, proteome and enzymatic activities in two lineages adapted to different blood sources

Nikola Polanska, Aygul Ishemgulova, [ ... ], Petr Volf

Comparative analysis of novel MGISEQ-2000 sequencing platform vs Illumina HiSeq 2500 for whole-genome sequencing

Dmitriy Korostin, Nikolay Kulemin, [ ... ], Alexey Gorbachev

Learning supervised embeddings for large scale sequence comparisons

Dhananjay Kimothi, Pravesh Biyani, [ ... ], Wayne Kelly

Characterization of the prohormone complement in Amphiprion and related fish species integrating genome and transcriptome assemblies

Bruce R. Southey, Sandra L. Rodriguez-Zas, Justin S. Rhodes, Jonathan V. Sweedler

Difference contact maps: From what to why in the analysis of the conformational flexibility of proteins

Mallika Iyer, Zhanwen Li, [ ... ], Adam Godzik

Extensive survey of the ycf4 plastid gene throughout the IRLC legumes: Robust evidence of its locus and lineage specific accelerated rate of evolution, pseudogenization and gene loss in the tribe Fabeae

Mahtab Moghaddam, Shahrokh Kazempour-Osaloo

Hexaploid sweetpotato (Ipomoea batatas (L.) Lam.) may not be a true type to either auto- or allopolyploid

Ming Gao, Sara Fuentes Soriano, [ ... ], Guquan Lu

Equiprobable discrete models of site-specific substitution rates underestimate the extent of rate variability

Frank Mannino, Sadie Wisotsky, Sergei L. Kosakovsky Pond, Spencer V. Muse

Identification and expression analysis of S-alk(en)yl-L-cysteine sulfoxide lyase isoform genes and determination of allicin contents in Allium species

Vahid Sayadi, Ghasem Karimzadeh, Sajad Rashidi Monfared, Mohammad Reza Naghavi

The stochastic nature of errors in next-generation sequencing of circulating cell-free DNA

David A. Nix, Sabine Hellwig, [ ... ], Hunter R. Underhill

Iron metabolic pathways in the processes of sponge plasticity

Alexander D. Finoshin, Kim I. Adameyko, [ ... ], Yulia V. Lyupina

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