Advertisement

Browse Subject Areas

?

Click through the PLOS taxonomy to find articles in your field.

For more information about PLOS Subject Areas, click here.

Sequence alignment

Using Sequence Similarity Networks for Visualization of Relationships Across Diverse Protein Superfamilies

Holly J. Atkinson, John H. Morris, Thomas E. Ferrin, Patricia C. Babbitt

Systematic Comparison of Three Methods for Fragmentation of Long-Range PCR Products for Next Generation Sequencing

Ellen Knierim, Barbara Lucke, [ ... ], Dominik Seelow

Phylogeny of Bacterial and Archaeal Genomes Using Conserved Genes: Supertrees and Supermatrices

Jenna Morgan Lang, Aaron E. Darling, Jonathan A. Eisen

MACSE: Multiple Alignment of Coding SEquences Accounting for Frameshifts and Stop Codons

Vincent Ranwez, Sébastien Harispe, Frédéric Delsuc, Emmanuel J. P. Douzery

BFAST: An Alignment Tool for Large Scale Genome Resequencing

Nils Homer, Barry Merriman, Stanley F. Nelson

Fast Identification and Removal of Sequence Contamination from Genomic and Metagenomic Datasets

Robert Schmieder, Robert Edwards

A Large-Scale, Higher-Level, Molecular Phylogenetic Study of the Insect Order Lepidoptera (Moths and Butterflies)

Jerome C. Regier, Charles Mitter, [ ... ], Kim T. Mitter

A Three-Stage Colonization Model for the Peopling of the Americas

Andrew Kitchen, Michael M. Miyamoto, Connie J. Mulligan

A workflow with R: Phylogenetic analyses and visualizations using mitochondrial cytochrome b gene sequences

Emine Toparslan, Kemal Karabag, Ugur Bilge

High-Throughput Sequencing of Arabidopsis microRNAs: Evidence for Frequent Birth and Death of MIRNA Genes

Noah Fahlgren, Miya D. Howell, [ ... ], James C. Carrington

Phylogenomics Reshuffles the Eukaryotic Supergroups

Fabien Burki, Kamran Shalchian-Tabrizi, [ ... ], Jan Pawlowski

Exploring the Use of Cytochrome Oxidase c Subunit 1 (COI) for DNA Barcoding of Free-Living Marine Nematodes

Sofie Derycke, Jan Vanaverbeke, [ ... ], Tom Moens

PoPoolation: A Toolbox for Population Genetic Analysis of Next Generation Sequencing Data from Pooled Individuals

Robert Kofler, Pablo Orozco-terWengel, [ ... ], Christian Schlötterer

Advertisement

Create a weekly email alert for: Sequence alignment

You can change these options by clicking profile then "Alerts and Notifications"