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Sequence alignment

Multidimensional Scaling Reveals the Main Evolutionary Pathways of Class A G-Protein-Coupled Receptors

Julien Pelé, Hervé Abdi, [ ... ], Marie Chabbert

Novel, Divergent Simian Hemorrhagic Fever Viruses in a Wild Ugandan Red Colobus Monkey Discovered Using Direct Pyrosequencing

Michael Lauck, David Hyeroba, [ ... ], Tony L. Goldberg

CORE: A Phylogenetically-Curated 16S rDNA Database of the Core Oral Microbiome

Ann L. Griffen, Clifford J. Beall, [ ... ], Eugene J. Leys

Tasting Soil Fungal Diversity with Earth Tongues: Phylogenetic Test of SATé Alignments for Environmental ITS Data

Zheng Wang, R. Henrik Nilsson, [ ... ], Jeffrey P. Townsend

Scoring Protein Relationships in Functional Interaction Networks Predicted from Sequence Data

Gaston K. Mazandu, Nicola J. Mulder

Prediction of Antimicrobial Peptides Based on Sequence Alignment and Feature Selection Methods

Ping Wang, Lele Hu, [ ... ], Kuo-Chen Chou

Selective Loss of Cysteine Residues and Disulphide Bonds in a Potato Proteinase Inhibitor II Family

Xiu-Qing Li, Tieling Zhang, Danielle Donnelly

Molecular Phylogeny of the Astrophorida (Porifera, Demospongiae^p) Reveals an Unexpected High Level of Spicule Homoplasy

Paco Cárdenas, Joana R. Xavier, [ ... ], Hans Tore Rapp

Optimizing the Design of Oligonucleotides for Homology Directed Gene Targeting

Judith Miné-Hattab, Geneviève Fleury, [ ... ], Jean-Louis Viovy

Palytoxin Found in Palythoa sp. Zoanthids (Anthozoa, Hexacorallia) Sold in the Home Aquarium Trade

Jonathan R. Deeds, Sara M. Handy, Kevin D. White, James D. Reimer

Identification of a Divergent Environmental DNA Sequence Clade Using the Phylogeny of Gregarine Parasites (Apicomplexa) from Crustacean Hosts

Sonja Rueckert, Timur G. Simdyanov, Vladimir V. Aleoshin, Brian S. Leander

A Comprehensive Benchmark Study of Multiple Sequence Alignment Methods: Current Challenges and Future Perspectives

Julie D. Thompson, Benjamin Linard, Odile Lecompte, Olivier Poch

Efficient and Cost Effective Population Resequencing by Pooling and In-Solution Hybridization

Vikas Bansal, Ryan Tewhey, Emily M. LeProust, Nicholas J. Schork

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